| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6985 |
|---|
| Symbol | |
|---|
| ID | 8331206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 8120931 |
|---|
| End bp | 8123618 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644947415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003104624 |
|---|
| Protein GI | 256380964 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACA CTGGGCCCGT GACCGAGCAA AGGCTGGAAG CCGAGCGGGC CAGGTTGGCC
GTCTCGGACT CGCCCACCGC ACCGTGGCGC CTGTGGGGCC CCTACCTGGC CGGACGCCAG
TGGGGGACGG TCCGCGAGGA CTACTCCGCG GGCGGTGACG CCTGGACGTC GTTCCCGTTC
GACCACGCGC GCTCGCGCGC CTACCGGTGG GGCGAGGACG GCATCGCGGG CATCTGCGAC
GTGCACGGGT TCCTCAACCT CGGGCTCGCG CTGTGGAACG GCCGCGACCC GATCCTGAAG
GAGCGGTACT TCGGGCTCAC CAACAACGAG GGCAACCACG GCGAGGACGC CAAGGAGCAC
TGGTGGGTCG TCGACGGGAC GCCCACGCAC TCCTGGATGA AGGTGCTCTA CCGCTACCCG
CAGACCGAGT TCCCCTACGC CGAGCTGCGC TCGATGTCCG CGCACGCGAC CAGGCAGGAC
CGCGAGCCGG AGCTGTCGGA CAGCGGCGCG CTGGACGAGA ACCGGTTCTT CGACGTCGAG
GTGACCTACG CCAAGGCGGG ACCGACCGAC GTGTGCGCGG TGCTGACCGC GACCAACCAC
GGGCCGGACG CCGCGCCGCT GCACCTGCTG CCGCAGCTGT GGTTCCGCAA CACCTGGGCG
TGGGGCCGCG ACGACCGCAG GCCGCACCTG ACCGCGTCGG CGCAGGACGG CTGGTCGCGG
GTGACCGCCG AGCACGGCGC GCTGGGCCGG TACACGCTGC ACGTCGAGGG CTCGCCGGTG
CTGCTGGTGA CCGACAACGA GACCAACGAG GTCGCCCTGT TCGGGGCCGC CGGGAACCCG
ACCCGCTACA CCAAGGACGG CGTCGACCGG CACGTCGTGT CCGGCGAGGC CGGGGCCTGC
CAGGTCGTGG GGCCCGGCGA GCGCAGCGCG CCCGGCACGA AGGCGGCGGC CTGGTACTCG
TTCGGGTCGG TGCAGCCGGG CGGGACGGTG ACCGTGCGGC TGCGGCTGGT GGAGGGCGAC
GGGCACCCGG ACGCGTTCGG GCCCTCGTTC GACGAGGTCG TGGGCGCGCG CTCGGCCGAG
GCCGACGAGT TCCACCGCAC CGACCTGGAC CCGGTGCGCG CGGGCGTGGT GCGCCGGGCG
ATGGCCGGGC TGATGTGGAC CAAGCAGCAC TACCGCTTCC GCACCAGCGA CTGGCTGGAG
GGCGACCCCG GCAAGCCCGC CGCGCCGACC TCGCGCAAGA GCCCGCACGC GCGCAACTCG
CACTGGCGGC ACTTCGACGT GGCCGACGTG ATCTCCATGC CGGACGAGTG GGAGTACCCC
TGGTTCGCCG CGTGGGACCT GGCGTTCCAC ACCGTGCCGT TCGCGCGGGT CGACCCGGCG
TTCGCGAAGG AGCAGCTGCT CCTGCTGTGC CGGGAGTGGC TGATGCACCC CAACGGCCAG
CTGCCCGCCT ACGAGTGGGA GTTCGGCGAC GTGAACCCGC CGGTGCACGC CTGGGCGGCG
CTCCAGGTGT ACCGGTCGGA GCCGACGCCG GACCGGAAGT TCCTGGCCAA GGTCTTCCAC
AAGCTGCTGC TGAACTTCTC CTGGTGGGTG AACCGCAAGG ACGCCGACGG CAGCTACCTG
TTCGAGGGCG GGTTCCTCGG CATGGACAAC ATCGGCCCGG TGAACCGGTC GGAGCCGATG
CTGGGGCAGT GGCGGCTGGA GCAGTCCGAC GCGACCTCGT GGATGGCGGC GTACTCGCTG
CACATGATGG AGATGGCGCT GGAGCTGGCG CGGGTCGACG ACTCGTACGA GGACGTGGCC
ACGAAGTTCG TGGAGCACTT CCTGAGCATC GCGGACGCGG CGGCGCAGTT CGGCTCGGGC
GGGCGCGGGA TCTGGGACGA GACTGACGGC TTCTGCTACG ACGTGGTGTC GCGGCGGCTG
CCGGACGGGT CGGTGGAGTC CAAGCCGGTG CGGGTGCGGT CGATGGTGGG CCTGATCCCG
GTGCTGGCGT GCGCGGTGCT GGAGCCGTGG GTGGACGCCG AGGTCCCCGG CTTCACCCGC
AGGCTGGAGC ACCTGCTGGC GCGCAGGCCG GAGCTGGCGC GGTTCATCAC CCGCGAGCCG
GACGGGCGGG CGCTGCTGTC GCTGCTGGAC GAGCGCAAGC TGCGGCTGGT GCTGACCCGG
ATGCTGGACG AGGGCGAGTT CCTGTCGCCG CACGGCATCC GGTCGCTGTC GGCGGCGCAC
CGGGAGGGCC TGGAGGTGCA GATCGCCGAC CAGGAGCACC GGATGGGCTA CGAGCCGGGC
GAGTCGCACA CGCCGATGTT CGGCGGCAAC TCGAACTGGC GCGGTCCGGT GTGGTTCCCG
ACGAACGCGC TGCTGGTCGA GGCGCTGCGC ACGATCGAGT CGTTCCACCG GGGAAGGTTT
CACGTGGAAC TTCCCACCCG CTCGCAGCGG CAGGTGACGG CCGGGCGCGC GGCGGACGAG
CTGGTGCGCA GGCTGGTGTC GCTGTTCCTG CCGGACTCGG ACGGGCGCAG GCCCTCGGAC
GGCAAGCGGG TGGAGTCGAC GGACTCACCG CTGTGGCGCG AGCACGTGAC CTTCAGCGAG
TACTTCGACG GGGACACCGG CGAGGGCTTG GGGGCCACTC ACCAGACCGG GTGGACGGCG
CTGGTCGCCT CGCTCCTGAC GGACCGACGT CACACCACGA ACCAGTGA
|
|---|
| Protein sequence | MSHTGPVTEQ RLEAERARLA VSDSPTAPWR LWGPYLAGRQ WGTVREDYSA GGDAWTSFPF
DHARSRAYRW GEDGIAGICD VHGFLNLGLA LWNGRDPILK ERYFGLTNNE GNHGEDAKEH
WWVVDGTPTH SWMKVLYRYP QTEFPYAELR SMSAHATRQD REPELSDSGA LDENRFFDVE
VTYAKAGPTD VCAVLTATNH GPDAAPLHLL PQLWFRNTWA WGRDDRRPHL TASAQDGWSR
VTAEHGALGR YTLHVEGSPV LLVTDNETNE VALFGAAGNP TRYTKDGVDR HVVSGEAGAC
QVVGPGERSA PGTKAAAWYS FGSVQPGGTV TVRLRLVEGD GHPDAFGPSF DEVVGARSAE
ADEFHRTDLD PVRAGVVRRA MAGLMWTKQH YRFRTSDWLE GDPGKPAAPT SRKSPHARNS
HWRHFDVADV ISMPDEWEYP WFAAWDLAFH TVPFARVDPA FAKEQLLLLC REWLMHPNGQ
LPAYEWEFGD VNPPVHAWAA LQVYRSEPTP DRKFLAKVFH KLLLNFSWWV NRKDADGSYL
FEGGFLGMDN IGPVNRSEPM LGQWRLEQSD ATSWMAAYSL HMMEMALELA RVDDSYEDVA
TKFVEHFLSI ADAAAQFGSG GRGIWDETDG FCYDVVSRRL PDGSVESKPV RVRSMVGLIP
VLACAVLEPW VDAEVPGFTR RLEHLLARRP ELARFITREP DGRALLSLLD ERKLRLVLTR
MLDEGEFLSP HGIRSLSAAH REGLEVQIAD QEHRMGYEPG ESHTPMFGGN SNWRGPVWFP
TNALLVEALR TIESFHRGRF HVELPTRSQR QVTAGRAADE LVRRLVSLFL PDSDGRRPSD
GKRVESTDSP LWREHVTFSE YFDGDTGEGL GATHQTGWTA LVASLLTDRR HTTNQ
|
|---|
| |