| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6984 |
|---|
| Symbol | |
|---|
| ID | 8331205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 8119338 |
|---|
| End bp | 8120747 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644947414 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_003104623 |
|---|
| Protein GI | 256380963 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCGAT CTGCGTTGAC CCGTACCGTC CGAAGCACCT GGGACGAGGA CGTCCTGCCC
AGCCTGACCG GGCTCGTCGC CGTGCCCGCC GTCTCCCCGG CGTTCGACCC GGACTGGGAG
GCGAGCGGCC ACCTCGACGC CGCCGTCGAG CACGTGCGCG CCTGGCTCGC CACCCGCGAC
CTGCCCGGCG CGCAGGTGGA GGTGGTCCGC CTGCCGGGAC GCACCCCGCT GCTCCTGGTG
GACGTGCCCG CCACGGCGGG TGACGACACC GTGCTGCTCT ACGGCCACCT CGACAAGCAG
CCGCCGGTCG CCAACTGGTC CGAGGGCCTG GCCCCGTGGA CCCCGGTCGT GCGCGACGGC
AGGCTCTACG GCCGGGGCTC GGCCGACGAC GGCTACTCCG GCTACGCGGC CGTCACCGCC
ATCGAGGCGG TGCGCGCGGC CGGTGGGCAG CACGCCCGGT GCGTGCTGCT GCTGGAGACC
AGCGAGGAGT CCGGCAGCCC CGACCTGCCC GCCTACCTGG AGCACCTCAC GCCGCGCCTG
GGCGACGTGT CGCTGGTCGT GTGCCTGGAC TCGGGCGGCA ACGACTACGA GCGGATGTGG
CTGACCACCT CGCTGCGCGG CCTGGTGCAG GTCGCCATGA CCGTGCGCGT GGTCGAGGGC
GGCCTGCACT CCGGCATGGC CAGCGGCATC GTGCCCAGCT CGTTCCGGAT CGCCAGGCAG
CTGCTCGACC GGCTGGAGGA CTCGGCCACC GGCGAGATCC AGCTCATGGA GATGCACGTC
GACGTGCCGG AGAACCGGGT CGACGAGATC CGCGAGGCCG TGGCCGCCGC GCCGGGCTCG
CTGACCGGGG CCGTGCCGTG GGCGGGCGGC ACCCAGCCGG TGGACGGGGA CGAGGTGCAG
TTGGCGCTCA ACAACGGCTG GCGGCCGACC CTGTCGATCA CCGGCGCGGA CGGCCTGCCC
AAGCCGGAGG ACGCGGGCAA CGTGCTGCGC CCCTCCACCA CGCTGGTGCT CAGCTTCCGG
CTGCCGCCGA CCGCCGACTC GGCCGCGGCG CTGGCCGCCG TGGAGCGCGC GCTGACCACC
GACGTGCCGT ACGGCGCGGT GGTGGAGCTG TCGCGCACCG AGCACGCGAC CGGCTGGAAC
GCGCCGGAGC TGGCCCCGTG GCTGCGCGAG TCGCTGGACC GGGTGGGCGC GGACGTGTTC
GGCTCGCCGT GGCGGACGGT GTCGCTGGGC GGGTCGATCC CGTTCATGGG CCTGCTGCAC
GAGGCGTACC CGGCGGCGCA GTTCCTGGTG ACCGGCGCGG TCGGCCCGGA CAGCAACTGC
CACGTGCCCG ACGAGTGGCT GAACCTGGCG CACGCCGCGC GGATCACCGA GGCCGTCGCG
GTCGTGCTGG ACGCCCACAC CCGCAGGTGA
|
|---|
| Protein sequence | MDRSALTRTV RSTWDEDVLP SLTGLVAVPA VSPAFDPDWE ASGHLDAAVE HVRAWLATRD
LPGAQVEVVR LPGRTPLLLV DVPATAGDDT VLLYGHLDKQ PPVANWSEGL APWTPVVRDG
RLYGRGSADD GYSGYAAVTA IEAVRAAGGQ HARCVLLLET SEESGSPDLP AYLEHLTPRL
GDVSLVVCLD SGGNDYERMW LTTSLRGLVQ VAMTVRVVEG GLHSGMASGI VPSSFRIARQ
LLDRLEDSAT GEIQLMEMHV DVPENRVDEI REAVAAAPGS LTGAVPWAGG TQPVDGDEVQ
LALNNGWRPT LSITGADGLP KPEDAGNVLR PSTTLVLSFR LPPTADSAAA LAAVERALTT
DVPYGAVVEL SRTEHATGWN APELAPWLRE SLDRVGADVF GSPWRTVSLG GSIPFMGLLH
EAYPAAQFLV TGAVGPDSNC HVPDEWLNLA HAARITEAVA VVLDAHTRR
|
|---|
| |