Gene Amir_6979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6979 
Symbol 
ID8331200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8113502 
End bp8114164 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID644947409 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003104618 
Protein GI256380958 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.941023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCAG AGCAGCAGGT CCGCGCCGGT CGGGCCAAGC GGCTGCCGCG CGCGGTGCGC 
GAGCGGCAGA TCCTCGACGC CGCGGTGGAC GTCTTCTCCC GGCTCGGCTT CCACGCCGCG
TCGATGGACG AGATATCCGA GGTCGCGGGC ATCTCCAAGC CCATGCTGTA CGCCTACCTC
GGCTCCAAGG AGGAGTTGTT CACCGCCTGC ACGCGGCGCG AGTCCGCCAG GCTGATGGAG
GCCATCGCCA CCGGCGTGGA GGTCGACCGG GCGGCGGACG TCCAGCTGTG GACGGGACTG
CGGGCGTTCT TCGGGTTCGT CGGCGAGCAC CGGGCGAGCT GGCTGGTGCT GCACCGCCAG
GCCACCTCGC AGGGCGGGCC GTTCGCGGCC GAGCTGGCGG AGCTGCGCGG GCGGGCGATC
GGCCTGGTGG CGGAGCTGGT GGCGCGGGCC GCCGTGGAGG CCGGGGTGCC CGGCACGGGC
GAGCGGGACG CCGAGAGCAT GGCCGCCGCG CTGGTCGGCG CGGGCGAGTC CCTGGCCGAC
TGGTGGCTGG ACCACCCGGA CGAGCCGTCG GGGGTCGTGG CGGCGCGGTT GATGAACCTG
GTGTGGATGG GGTTCGGGGA CCTGGTCGAC GGGCGGGTCT GGCACCCTGG CTCGCCCGAA
TAG
 
Protein sequence
MAAEQQVRAG RAKRLPRAVR ERQILDAAVD VFSRLGFHAA SMDEISEVAG ISKPMLYAYL 
GSKEELFTAC TRRESARLME AIATGVEVDR AADVQLWTGL RAFFGFVGEH RASWLVLHRQ
ATSQGGPFAA ELAELRGRAI GLVAELVARA AVEAGVPGTG ERDAESMAAA LVGAGESLAD
WWLDHPDEPS GVVAARLMNL VWMGFGDLVD GRVWHPGSPE