Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6979 |
Symbol | |
ID | 8331200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8113502 |
End bp | 8114164 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947409 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003104618 |
Protein GI | 256380958 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.941023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCAG AGCAGCAGGT CCGCGCCGGT CGGGCCAAGC GGCTGCCGCG CGCGGTGCGC GAGCGGCAGA TCCTCGACGC CGCGGTGGAC GTCTTCTCCC GGCTCGGCTT CCACGCCGCG TCGATGGACG AGATATCCGA GGTCGCGGGC ATCTCCAAGC CCATGCTGTA CGCCTACCTC GGCTCCAAGG AGGAGTTGTT CACCGCCTGC ACGCGGCGCG AGTCCGCCAG GCTGATGGAG GCCATCGCCA CCGGCGTGGA GGTCGACCGG GCGGCGGACG TCCAGCTGTG GACGGGACTG CGGGCGTTCT TCGGGTTCGT CGGCGAGCAC CGGGCGAGCT GGCTGGTGCT GCACCGCCAG GCCACCTCGC AGGGCGGGCC GTTCGCGGCC GAGCTGGCGG AGCTGCGCGG GCGGGCGATC GGCCTGGTGG CGGAGCTGGT GGCGCGGGCC GCCGTGGAGG CCGGGGTGCC CGGCACGGGC GAGCGGGACG CCGAGAGCAT GGCCGCCGCG CTGGTCGGCG CGGGCGAGTC CCTGGCCGAC TGGTGGCTGG ACCACCCGGA CGAGCCGTCG GGGGTCGTGG CGGCGCGGTT GATGAACCTG GTGTGGATGG GGTTCGGGGA CCTGGTCGAC GGGCGGGTCT GGCACCCTGG CTCGCCCGAA TAG
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Protein sequence | MAAEQQVRAG RAKRLPRAVR ERQILDAAVD VFSRLGFHAA SMDEISEVAG ISKPMLYAYL GSKEELFTAC TRRESARLME AIATGVEVDR AADVQLWTGL RAFFGFVGEH RASWLVLHRQ ATSQGGPFAA ELAELRGRAI GLVAELVARA AVEAGVPGTG ERDAESMAAA LVGAGESLAD WWLDHPDEPS GVVAARLMNL VWMGFGDLVD GRVWHPGSPE
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