Gene Amir_6978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6978 
Symbol 
ID8331199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp8112762 
End bp8113400 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content74% 
IMG OID644947408 
Producthypothetical protein 
Protein accessionYP_003104617 
Protein GI256380957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.664684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCATCG ACCTCACCAC CGAGGCCGTG GCGGGACTCA GGCCCGCCGA GCTGATCTCC 
GCGCTGGAGG GCGCGAGCCC CGACGATCCG GCGCTGCGCT CCGCCGACGT CGACGCCATC 
GCCGAGGGAG TCGACCCGCG CAAGCTCAGC GAGGGCGAGT TCGCCGACCT GCTCGCCGCG 
CTGGGCGCGT TGGCCGACGC GGGAGCCCCG CTCGACCTGG CCGCCATGGG CGCGCCGAAC 
TTCGCCCGCC TGGTGTCGCG CGCGTCCAAG GGGCAGCTGG ACGAGGCGTT CGCCCGGCCC 
ACCGTGCGCG GGCGCGTGCT GGACGAGGTG TTCCGGCGCA TGGAGGAGCA CTTCCGGCCC 
GAGCGCGCGG GCGCGACGCG GGCCGTGGTG CACTTCGTGC TCACCGGGGC CGAGGAGGAC 
CGCTACCAGG TCGTGGTGGA GGACGAGCGC TGCTCGATCG CCAAGGACCT CGACCGCGAG 
CCGCGCGCGG TGGTGACGGC CGGGCCGACG GACTTCGTGA AGCTGGCGAC CGGCAACGCG 
TCCGCGCCCG TGCTGTTCAT GACCGGCAAG CTCAAGATCC GGGGCGACCT GGGCCTCGCG 
GCCGGGTTCA TGAGCCTGTT CGACATCCCG AGGGGTTGA
 
Protein sequence
MSIDLTTEAV AGLRPAELIS ALEGASPDDP ALRSADVDAI AEGVDPRKLS EGEFADLLAA 
LGALADAGAP LDLAAMGAPN FARLVSRASK GQLDEAFARP TVRGRVLDEV FRRMEEHFRP 
ERAGATRAVV HFVLTGAEED RYQVVVEDER CSIAKDLDRE PRAVVTAGPT DFVKLATGNA 
SAPVLFMTGK LKIRGDLGLA AGFMSLFDIP RG