| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6965 |
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| Symbol | |
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| ID | 8331186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 8097981 |
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| End bp | 8100659 |
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| Gene Length | 2679 bp |
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| Protein Length | 892 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644947397 |
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| Product | VanW family protein |
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| Protein accession | YP_003104606 |
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| Protein GI | 256380946 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGGAGA ATCAGCGACC GGAGCACGAC GCCGAGCGGA CCACGGCCAT GAAGAAGCCG
TCCCGCCCGC CGTCGAGCAC TGCTTCGGAG CGCACCACGA TCATCTCCGC CTCGGCGGTG
AACCAGGGCT GGCCGTCGGA GGAGCCCGAC GCCGCCACCG CCGCCACGAG CACCGGGTCG
GACGCGTCTT CCGCGGCCAC CGTGCAGAAC GTGCAGCCCG CGAGCGACGT GACGCGCGCG
CTCGACCCGG AGGGCGCCAA GCCCAAGGCC GACGTGACGC GCGCGCTCAA CCCCGAGGGT
GCGCCGGGCG GCGCCGCCGA GGCGACGACG AAGAGCAGTG AGAACGGCAG CGAGAAGGGC
AGCGGGAAGG GCGAGGACGC CGCCGGTCAG ACCGGCGGCG AGCAGGACCC GCCGTGGATG
CGGGCGGGCG GCCGGCAGGG GACTCCCCCG GCCGGCATTC CCCAGCCCGG AACTCCCCAG
GCGGGGGCGA ACCAGAACCA GTCCGGGGCC GCCCAGCCGG GGACTCCCCC GTCGGGGATT
CCCCAGGCGG GCGGTTCCCA GGACGTCACC CGGAACCTGA GCGCGGACGC GACGAAGAAC
CTCGGCGCGG ACGCCACCCA GGCGGTGACC CCCGAGGGGC AGCGGACCTT CCAGTCCGCA
CCGCCCCCCG GTTCCACCGA GGCGACCGCG GTCTTCGCGC CCGTCACCGG GGGTGGCGAC
ACCACCGTCG TGAACCCCGG TCGGGGGACC ATCCCGCCGG GCGCGCGCAC CGGGACCCCG
GCGGCGGGCA TCCCGATGGG CACCCCGCCG GGCGGCATGA GCGTGCCTCC GGGCACCCCG
CCCGGTGGCA TGAGCGTCCC GCCGGGCCAG CGCCCCGGCA CGTTCCCGCC CCAGGGGGCG
GCGAACCCGG CCGAGGCGAC GGTGCTCGGC CCGCACATGG TCGAGCAGCA GCCGGGCGGG
GACGCCCCGG CGTCCGACGC CGACGCCAAG CGGCGGCGCA ACCGCAAGAT CGGTCTGGTC
GCGGCGTCCG TCGTGGGCGC GCTCGCGGTC CTGTGGGGCG TCGACCTCGC GGTGTCCAGC
GGCAACGTCC CGCGCGGCGT CACGGTCGCG GGCGTCGACG TCGGCGGCAT GAGCCACTCC
GACGCCGAGG GCAAGCTCCG CGACGAGATC AGCCCCCGGC TGGAGAAGCC GATCAAGGTC
AAGGCCGGTG ACGTCGAGAC CGAGCTGGAC CCGAGGTCGG CGGGCTTGGA GCTGGACTGG
ACCGCCACGC TCGACCAGGC GGGCAGCCAG CCGCTGTCCC CGATCACCAG GGTCACCTCG
TTCTTCAGCA CCCGCGAGGT CGGCATCGTC TCCAAGGCGG ACGACGCCAA GGTGACCGCC
GCCCTGGAGG GCCTGCGCGG CACGACCGAC CACGACCCGG CCGAGGGCAC GATCCGCTTC
GAGGGCGCCA AGCCCGTCGC GGTCGACCCG AAGCAGGGCC AGAAGCTGGA GGTCCCCGAG
GCGTCCGGCG TGCTGCTGTC CAGCTGGGCC AACGGCAACG GCGTCGAGCT CCCGGTCGCC
ACCACCCCGG TGAAGACCAC CAAGGAGGGC GTCGCCAAGG CGCTGGAGGA GGTCGCCGCG
CCTGCGGTCG CCTCCCCGGT CGTCATCAAG GGCGAGGGCA AGGACGCCAC CCTGGCCCCG
GAGAACCTGG CCACCGTCCT GGTGTTCGAG CCCGCCGACG ACGGCTCGCT GAACGCCAAG
GTGGACAACG GCAAGGTGAT CGAGGCCGCC GGTCCCCAGC TGAAGGAGAC CGAGAAGGAG
GGCAAGGACG CCGAGATCGT CTTCGACGGC GGCAGGCCCA CCGTGAAGGA GTCGGTCGAC
GGCCTCGGGG TCGACTGGGA CAAGTCCCTG AACGGCTTCA TCGACGTGCT CAAGCGCGGC
GACAAGCGCG AGGTCAAGGC GGAGTACAAG CACACGCCCG CCAAGGTGAC CACCGAGCAG
GCGAACAAGA TGGGCATCAA GGAGGTCATC GGCGAGTTCC AGACCGGTGG CTTCGCCCAG
GACTCCGGCG TGAACATCCG CGTGGTGGCC GAGAAGGTCA ACGGCGCGAT CGTGAAGCCG
GGCGAGACGT TCAGCCTCAA CGGCTACACC GGTCCGCGCG GCAAGGCGGA GGGCTACGTG
GACGCGGGCA TCATCGAGAA CGGCGCCCCC GGCCGCGCGG TCGGCGGCGG CATCTCGCAG
TTCGCCACGA CGCTCTACAA CGCCTACTAC TACGCGGGCA TGAAGGACGC CGGGCACAAG
GAGCACAGCT ACTGGATCTC CCGGTACCCG GCGGGCCGCG AGGCCACGGT GTTCATGGAC
ACGGCGGGCA ACAGCCTGAT CGACATCAAG TTCACCAACC CGGACGACAC GGGCGTCGCG
ATCCAGACGA TCTGGACCGC GGGCTCCATC AAGATCGTGC TCTGGGGCAC CAAGAACTAC
GACGTCACCG GCTCGACGGG CGAGAAGACC AGTCCCACCG AGCCGCAGGA GATCAAGAAG
TCCACGCAGC CGTGCGTCGC GAGCGCGGGC GCCCAGGGCT TCACGGTCAC CGACACCCGC
ACGATCAAGG ACCGGCGCAC CGGCCAGACG CGGAACGAGA CCCGCACCGT CAAGTACGAC
CCGTCGCCCA AGATCGTGTG CGAGGCGCCG CCCGCCTAG
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| Protein sequence | MPENQRPEHD AERTTAMKKP SRPPSSTASE RTTIISASAV NQGWPSEEPD AATAATSTGS
DASSAATVQN VQPASDVTRA LDPEGAKPKA DVTRALNPEG APGGAAEATT KSSENGSEKG
SGKGEDAAGQ TGGEQDPPWM RAGGRQGTPP AGIPQPGTPQ AGANQNQSGA AQPGTPPSGI
PQAGGSQDVT RNLSADATKN LGADATQAVT PEGQRTFQSA PPPGSTEATA VFAPVTGGGD
TTVVNPGRGT IPPGARTGTP AAGIPMGTPP GGMSVPPGTP PGGMSVPPGQ RPGTFPPQGA
ANPAEATVLG PHMVEQQPGG DAPASDADAK RRRNRKIGLV AASVVGALAV LWGVDLAVSS
GNVPRGVTVA GVDVGGMSHS DAEGKLRDEI SPRLEKPIKV KAGDVETELD PRSAGLELDW
TATLDQAGSQ PLSPITRVTS FFSTREVGIV SKADDAKVTA ALEGLRGTTD HDPAEGTIRF
EGAKPVAVDP KQGQKLEVPE ASGVLLSSWA NGNGVELPVA TTPVKTTKEG VAKALEEVAA
PAVASPVVIK GEGKDATLAP ENLATVLVFE PADDGSLNAK VDNGKVIEAA GPQLKETEKE
GKDAEIVFDG GRPTVKESVD GLGVDWDKSL NGFIDVLKRG DKREVKAEYK HTPAKVTTEQ
ANKMGIKEVI GEFQTGGFAQ DSGVNIRVVA EKVNGAIVKP GETFSLNGYT GPRGKAEGYV
DAGIIENGAP GRAVGGGISQ FATTLYNAYY YAGMKDAGHK EHSYWISRYP AGREATVFMD
TAGNSLIDIK FTNPDDTGVA IQTIWTAGSI KIVLWGTKNY DVTGSTGEKT SPTEPQEIKK
STQPCVASAG AQGFTVTDTR TIKDRRTGQT RNETRTVKYD PSPKIVCEAP PA
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