| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6955 |
|---|
| Symbol | |
|---|
| ID | 8331175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8085172 |
|---|
| End bp | 8086362 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644947386 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003104596 |
|---|
| Protein GI | 256380936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGC TGGTCGCGGT CACCGCGGTG CTGATGCTCC TCGGCGGTGG CACCGCCCTG
GCCCAGGACG GCGAGGTCCT CGAAGGCCTC ATCTGGTTCG ACCGGAACGG CAACGGCGTC
GTCGACGCAG GTGAGCCCGC CCTCGCCTCG GGGAAGGGCG TCCGGGTCTT CAACGCCGCC
ACCAAGGAGC ACATCGGCGA GTACGGCACC GACGCCAACG GCCGCTACCG CGCGACGGGC
CTGCCCTCCG GCACCCCGCT GGCGATCTAC AACGCCAACA CCGACCGCTA CGCGACCACC
ACGCCCTCTT CGGTGTTCCG CACCGGCGGC GGGACGCTCG ACTTCGGCAT CCGGGGCGGC
GTCGTCACCG GCTCGGCCTT CGTCGACGCG GACCGGGACG GCGTGCGGGA CGCGGGCGAG
CGCGAGCTCC AGCCCGCGCA CCGGCTCGGC GGTCTCACCG CCACCGGCTC GTACCGCATC
GAGGACGTCC CCGAGGACGA CCACGAGCTG GTGCTCGCAG ACCTGCGCGC CCAGGGCCTG
CTGCCCTCCG CCGTCACCAC GAGGCTGTTC GTCGGCAAGG GCGCGCAGGT CCGCGTGGAC
ACCCCGTACT TCGCGCCGCG CGCCGACCTC GTCCTCGGCG AGCTGAAGCT CGGCCCGGAC
AAGCCCGGCG CCCGCGCCAC CGGCGACGAG GTCGAGCTGT CCTTCGCCAT CACCAACTCC
GGCGAGGCGG CGGACGGCGT GCGCTTCACC GTCGACCGGC CGAAGGCGAA GCTGCTGTCC
ACCGGCGAGG GCGTCGTGGC CGAGGGCGAC GGCTTCGCGC TGACCGCGCC GCTGGAGCCG
GGCGCCACCG CGACCGCGAA GCTCCGCTAC GCCCTGACCG ACCCGACGAT CACCGGTTTC
CGGGTCGTCC TCGCGCCGGG GACCACGTTC GGCGACGGCG ACCAGGGCGA CAACACCGCC
GAGGTGGCGC TCTCCGTCAC CGCCCCGCCG TCCAGCACCC CGCCGTCCAC CACGTCCGCG
CCCGGCAGCT CGACGGCCCC CACGACCACC ACGCCCCCGG TCGGCGGCGC GCCGAAGCAG
CTGGCCAGGA CCGGCGCCGC CCCGTTCTGG CCGCTGCTGA CCGGCCTCGC CCTGCTGGCC
GCAGGTCTGG CCCTGCACCA CGCCGCCCGC GCCCGCCGCC GTCGCGCCTG A
|
|---|
| Protein sequence | MKKLVAVTAV LMLLGGGTAL AQDGEVLEGL IWFDRNGNGV VDAGEPALAS GKGVRVFNAA
TKEHIGEYGT DANGRYRATG LPSGTPLAIY NANTDRYATT TPSSVFRTGG GTLDFGIRGG
VVTGSAFVDA DRDGVRDAGE RELQPAHRLG GLTATGSYRI EDVPEDDHEL VLADLRAQGL
LPSAVTTRLF VGKGAQVRVD TPYFAPRADL VLGELKLGPD KPGARATGDE VELSFAITNS
GEAADGVRFT VDRPKAKLLS TGEGVVAEGD GFALTAPLEP GATATAKLRY ALTDPTITGF
RVVLAPGTTF GDGDQGDNTA EVALSVTAPP SSTPPSTTSA PGSSTAPTTT TPPVGGAPKQ
LARTGAAPFW PLLTGLALLA AGLALHHAAR ARRRRA
|
|---|
| |