Gene Amir_6949 details

Gene Information

• Locus tag: Amir_6949
• Symbol: dnaK
• ID: 8331169
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 8078133
• End bp: 8079992
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644947380
• Product: molecular chaperone DnaK
• Protein accession: YP_003104590
• Protein GI: 256380930
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCGAG CGGTCGGCAT CGACCTGGGG ACGACCAACT CCGTCGTCGC GGTCCTGGAG 
GGTGGCGAGC CGACGGTGAT CGCCAACTCC GAGGGGTCGC GCACCACCCC GTCCATCGTG 
GCCTTCGCCA AGAACGGCGA GGTCCTCACC GGTCAGCCCG CCAAGAACCA GGCGGTGACC 
AACGTCGACC GGACGATCCG GTCGGTCAAG CGCCACATCG GCACCACGTG GACGACCGAC 
GAGGTCGACG GCAAGAAGTA CACCCCGCAG GAGATCAGCG CCCGCGTGCT GATGAAGCTC 
AAGCGGGACG CCGAGGCGTA CCTGGGCGAG GAGATCACCG ACGCGGTGAT CACCGTCCCC 
GCCTACTTCG AGGACTCGCA GCGCCAGGCC ACCAAGGAGG CCGGGCAGAT CGCGGGCCTG 
AACGTCCTGC GCATCGTCAA CGAGCCCACC TCCGCCGCCC TGGCCTACGG CCTGGACAAG 
GGCGAGAAGG AGCAGACCAT CCTGGTCTTC GACCTCGGTG GCGGCACCTT CGACGTCTCC 
CTGCTGGAGC TGGGCGACGG CGTGGTCGAG GTCCGGGCGA CCTCCGGCGA CAACCACCTC 
GGCGGCGACG ACTGGGACCA GCGCGTCGTC GACTGGCTGG TCGAGCGGTT CAAGCAGGCG 
AACGGCATCG ACCTGACCAA GGACAAGATG GCGCTGCAGC GCATCCGCGA GGCCGCGGAG 
AAGGCGAAGA TCGAGCTGTC CAGCTCGAAC AGCGCCTCCA TCAACCTGCC GTACATCACG 
GTCGACTCGG ACAAGAACCC GCTGTTCCTG GACGAGACCC TCTCCCGCGC CGAGTTCCAG 
CGCATCACGA ACGACCTGCT GGAGCGCACC CGCGCGCCGT TCACCAACGT GATCAAGGAC 
GCGGGCATCA GCGTCGGCGA CATCGACCAC GTGGTCCTGG TCGGCGGCTC CACCCGGATG 
CCCGCCGTCA GCGAGCTCGT CAAGGAGCTG ACCGGCGGTC GCGAGCCCAA CAAGGGCGTG 
AACCCGGACG AGGTTGTCGC CGTCGGCGCC GCCCTGCAGG CCGGCGTCCT GCGCGGCGAG 
GTCAAGGACG TCCTGCTGCT CGACGTCACC CCGCTCTCCC TGGGCATCGA GACCAAGGGC 
GGCGTGATGA CCAAGCTCAT CGAGCGCAAC ACGACGATCC CGACCAAGCG CTCCGAGATC 
TTCACGACGG CCGACGACAA CCAGCCGTCC GTGCAGATCC AGGTCTTCCA GGGCGAGCGC 
GACTTCGCGG CCGACAACAA GAAGCTCGGC ATGTTCGAGC TGACCGGCCT CCCGCCCGCC 
CCGCGCGGCG TCCCGCAGAT CGAGGTCACC TTCGACATCG ACGCGAACGG CATCGTGCAC 
GTGTCCGCCA AGGACATGGG CACGGGCAAG GAGCAGCGGA TGACGATCAC CGGCGGCTCC 
GCGCTGCCGA AGGACGACAT CGAGCAGATG ATCAAGGACG CCGAGGCGCA CGCGGAGGAG 
GACAAGCGCC GCCGCGACGA GGCCGAGGTC CGCAACCAGG CCGAGACCCT CGTCTACCAG 
ACCGAGAAGG TCGTCAAGGA GAACGAGGAC AAGATCCCGG CCGAGGTCCA GGAGAAGGTC 
CGCGCGGCCA TCGCCGAGAC CAGCGAGGCG CTCAAGGGCA CCGACATCGC CAAGGTCCGC 
GCCGCCGTGG AGAAGCTCGC CACCGAGTCG CAGGCCATCG GCCAGGCCAT GTACGCGGGC 
AGCGCGCCCA CCGACGCCGC CGCGGGCTCC GCGCCCGGCG CCGAGGGCGA CGCCAAGCCC 
GGCGCCAAGG CCGACGACGT GGTCGACGCC GAGATCGTCG ACGAGGACGA GAAGAAGTGA 

 

Protein sequence

MARAVGIDLG TTNSVVAVLE GGEPTVIANS EGSRTTPSIV AFAKNGEVLT GQPAKNQAVT 
NVDRTIRSVK RHIGTTWTTD EVDGKKYTPQ EISARVLMKL KRDAEAYLGE EITDAVITVP 
AYFEDSQRQA TKEAGQIAGL NVLRIVNEPT SAALAYGLDK GEKEQTILVF DLGGGTFDVS 
LLELGDGVVE VRATSGDNHL GGDDWDQRVV DWLVERFKQA NGIDLTKDKM ALQRIREAAE 
KAKIELSSSN SASINLPYIT VDSDKNPLFL DETLSRAEFQ RITNDLLERT RAPFTNVIKD 
AGISVGDIDH VVLVGGSTRM PAVSELVKEL TGGREPNKGV NPDEVVAVGA ALQAGVLRGE 
VKDVLLLDVT PLSLGIETKG GVMTKLIERN TTIPTKRSEI FTTADDNQPS VQIQVFQGER 
DFAADNKKLG MFELTGLPPA PRGVPQIEVT FDIDANGIVH VSAKDMGTGK EQRMTITGGS 
ALPKDDIEQM IKDAEAHAEE DKRRRDEAEV RNQAETLVYQ TEKVVKENED KIPAEVQEKV 
RAAIAETSEA LKGTDIAKVR AAVEKLATES QAIGQAMYAG SAPTDAAAGS APGAEGDAKP 
GAKADDVVDA EIVDEDEKK