| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6943 |
|---|
| Symbol | |
|---|
| ID | 8331163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 8070630 |
|---|
| End bp | 8073212 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644947374 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_003104584 |
|---|
| Protein GI | 256380924 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCTT TCAACCCGAC CACCAAGAGC CAGCAGGCGG TGTCCGCGGC GGTGCAGGCG
GCGACGATCG CGGGCAACCC GGACGTCGGC CCCGTCCACC TGCTCGGCGC GCTGCTCGCG
CAGGGCGAGG GCCTGGCCGC GCCCCTGCTG TCCGGGGTCG GCGCCGACCC CGGCGTGATC
CGCAAGGAGC TGGAGCAGCT CAGCCGGACG CTGCCCGCCG CCAGCGGCTC CTCGATCTCC
GCGCCGCAGT TCTCCCGCGA CGCCGTCCGG GTGCTCACCA GGGCCCAGGA GCTCGCCACC
GAGATGGGCG ACGAGTACGT CTCCACCGAG CACCTGCTCG TCGGGCTCGC CCAGCACGGC
GGCCAGGTCG CCGACCTGCT GCGCCGCCAC GGCGCGAACC CGGAGGCCCT GCGCGAGGCG
TTCGAGAAGG TGCGCGGCTC CGCCCGCGTC ACCAGCCCCG ACCCCGAGGG CACCTACAAG
GCGCTGGAGA AGTACGGCGT CGACCTCACC GCCCGCGCCC GCCGGGGCGA GCTGGACCCG
GTGATCGGCC GCGACTCGGA GATCCGCCGC GTCGTCCAGG TGCTGTCCCG GCGCACCAAG
AACAACCCGG TGCTGATCGG CGAGCCCGGC GTCGGCAAGA CCGCGATCGT GGAGGGCCTC
GCCCAGCGCG TCGTGGCCGG TGACGTGCCC GAGTCGCTGC GCGGCAAGCG CGTGGTCTCC
CTCGACCTCG GCTCGATGGT CGCGGGCGCC AAGTACCGGG GCGAGTTCGA GGAGCGGCTC
AAGGCCGTCC TCAAGGAGAT CACCGACTCG GCGGGCCAGG TCATCACCTT CATCGACGAG
CTGCACACCA TCGTCGGCGC GGGCGCCACC GGCGAGTCCG CCATGGACGC GGGCAACATG
ATCAAGCCCA TGCTCGCCCG CGGCGAGCTG CGCCTGGTCG GCGCCACCAC CCTGGACGAG
TACCGCTCGC ACGTGGAGAA GGACCCGGCG CTGGAGCGCC GCTTCCAGCA GGTCCTCGTC
GGCGAGCCCT CGGTCGAGGA CACCATCGGC ATCCTGCGCG GCCTCAAGGA GCGCTACGAG
GTGCACCACG GCGTGCGCAT CACCGACGCC GCCCTGGTCG CCGCCTCCAC CCTGTCCGAC
CGCTACATCA CCGCCCGCTT CCTGCCCGAC AAGGCCATCG ACCTGGTCGA CGAGGCCGCC
TCCCGGCTCC GCATGGAGAT CGACTCCCGC CCGGTCGAGA TCGACGAGGT CGAGCGCGCC
GTGCGCCGCC TGGAGATCGA GGAGATGGCG CTGGCGAAGG AGTCCGACGA GGCCTCCCGC
GAGCGGCTGG CCGCGCTGCG CGCCGAGCTG GCCGAGCGCC GCGAGTCGCT GGCCGCGCTG
ACCGCCCGCT GGCAGAACGA GAAGGGCTCC ATCGACAAGG TCCGGGTGCT CAAGGAGCAG
CTGGAGCAGC TGCGCGGCGA GTCCGAGCGC GCCGAGCGCG ACGGCGACCT CGGCCGGGCC
GCCGAGCTGC GCTACGGCCG CATCCCCGCG CTGGAGAAGG AGCTGGAGGA GGCCACCCGC
ACCACGCAGG AGGCCGCCGT CATGCTCAAG GAGGAGGTCG GCCCGGACGA CGTGGCCGAC
GTCGTCAGCG CGTGGACCGG CATCCCGGCG GGCCGGATGC TGGAGGGCGA GACCACCAAG
CTGCTGCGCA TGGAGGACGA GCTGACCGGC CGCGTGGTCG GCCAGGCCGA GGCCGTCCGG
GTCGTCTCCG ACGCCGTCCG CCGCACCAGG GCGGGCGTGG CCGACCCCGA CCGCCCCACC
GGCTCGTTCC TGTTCCTCGG CCCCACCGGC GTCGGCAAGA CCGAGCTGGC CAAGGCGCTG
GCGCAGTTCC TGTTCGACGA CGAGCGGGCG ATGATCCGCA TCGACATGAG CGAGTACTCC
GAGAAGCACT CGGTGGCCCG CCTGGTCGGC GCGCCCCCCG GCTACGTCGG CTACGACCAG
GGCGGCCAGC TGACCGAGTC GGTCCGCCGC AGGCCCTACT CGGTGGTGCT GCTGGACGAG
GTCGAGAAGG CCCACCCGGA CGTGTTCGAC GTGCTCCTGC AGGTGCTCGA CGACGGCAGG
CTCACCGACG GCCAGGGCCG CACCGTCGAC TTCCGCAACA CCATCCTGGT GCTCACCTCG
AACCTCGGCT CGCACGCGAT CGCGGACGTG TCGCTGGACG AGCGCGGGCG CGAGGACGCG
GTCATGCAGG TGGTGCGCGG CCACTTCAAG CCCGAGTTCC TCAACCGGCT GGACGACGTC
GTGGTGTTCC GCTCGCTCGC GACCGAGGAG CTGACCTCGA TCGTGGACAT CCAGGTCGCC
AAGCTGGCGG CCAGGCTCGC GCAGCGCAGG CTCGTCCTGG AGGTCACCCC GGCCGCCAGG
GAGTGGTTGG CGCTCAACGG CTTCGACCCG GTCTACGGCG CCCGCCCGCT GCGCAGGCTG
GTCCAGTCCT CCATCGGCGA CCAGCTGGCC CGCGAGCTGC TCTCCGGCGA GGTGCGCGAC
GGCGACGCGG TCCGGGTCGA CGTGCTCGAC GACGCGACCG GCCTGATCGT CGGCAAGGCC
TGA
|
|---|
| Protein sequence | MDAFNPTTKS QQAVSAAVQA ATIAGNPDVG PVHLLGALLA QGEGLAAPLL SGVGADPGVI
RKELEQLSRT LPAASGSSIS APQFSRDAVR VLTRAQELAT EMGDEYVSTE HLLVGLAQHG
GQVADLLRRH GANPEALREA FEKVRGSARV TSPDPEGTYK ALEKYGVDLT ARARRGELDP
VIGRDSEIRR VVQVLSRRTK NNPVLIGEPG VGKTAIVEGL AQRVVAGDVP ESLRGKRVVS
LDLGSMVAGA KYRGEFEERL KAVLKEITDS AGQVITFIDE LHTIVGAGAT GESAMDAGNM
IKPMLARGEL RLVGATTLDE YRSHVEKDPA LERRFQQVLV GEPSVEDTIG ILRGLKERYE
VHHGVRITDA ALVAASTLSD RYITARFLPD KAIDLVDEAA SRLRMEIDSR PVEIDEVERA
VRRLEIEEMA LAKESDEASR ERLAALRAEL AERRESLAAL TARWQNEKGS IDKVRVLKEQ
LEQLRGESER AERDGDLGRA AELRYGRIPA LEKELEEATR TTQEAAVMLK EEVGPDDVAD
VVSAWTGIPA GRMLEGETTK LLRMEDELTG RVVGQAEAVR VVSDAVRRTR AGVADPDRPT
GSFLFLGPTG VGKTELAKAL AQFLFDDERA MIRIDMSEYS EKHSVARLVG APPGYVGYDQ
GGQLTESVRR RPYSVVLLDE VEKAHPDVFD VLLQVLDDGR LTDGQGRTVD FRNTILVLTS
NLGSHAIADV SLDERGREDA VMQVVRGHFK PEFLNRLDDV VVFRSLATEE LTSIVDIQVA
KLAARLAQRR LVLEVTPAAR EWLALNGFDP VYGARPLRRL VQSSIGDQLA RELLSGEVRD
GDAVRVDVLD DATGLIVGKA
|
|---|
| |