Gene Amir_6928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6928 
Symbol 
ID8331148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp8059601 
End bp8060275 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content71% 
IMG OID644947359 
ProductSNARE associated Golgi protein 
Protein accessionYP_003104569 
Protein GI256380909 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGCTGT CCGCTTCGAC CCAAGCCGCC GGGATCTTCT CCTTGGACCA GGCAGGTCCC 
CTCGCGGTGT GGGTGATCAC CCTCAGCTTC GTGTTCTTCG AGTGCGCGTT CATCTTCGGG 
CTGTTCCTGC CCGGCGACTC GCTGCTGTTC GCGGCGGGCG TCGTGCTGGC CCAGCACGAC 
GGCGAGCTGA GCGCCTGGCT GCTGTCGGCC GCCGCGATGG TGGTGGCGGT GGTGGGCAAC 
CAGATCGGCT ACTACATCGG CCGCACCGGT GGCACCCGGC TGCTCGCCAG GCGCGGCGGG 
AAGATCCTGA ACAAGGAGAA CCTGGAGCGG GCGCGCGAGT TCCTGGACCG CCGGGGGTTC 
TGGGCGATCG TGCTGGCCAG GTGGATCCCG TGGATCCGCA CGTTCGCGCC GATGATCGCG 
GGCGCGGCCG GGATGAACCC GAGGCGGTTC GCGCTGGCCA CCACGGTGGG AGCGCTGGCC 
TGGGTGCCGA CCCTGGTGCT CGCGGGCTAC TACGCGGCAG GCCTGCTCAC GGCGGTGCCG 
TGGCTGGAGG CGGCCGCCGT CGTGGTGAGC GTCGCGTTCT TCGTGATCGG CACCGGCGTC 
GGCGTGTGGC GCTACCGCCA GGAGGTGCGC AAGCCGGTGG ACGAGACGGT CGAGGACGTC 
GCCGCGCAGC GCTGA
 
Protein sequence
MVLSASTQAA GIFSLDQAGP LAVWVITLSF VFFECAFIFG LFLPGDSLLF AAGVVLAQHD 
GELSAWLLSA AAMVVAVVGN QIGYYIGRTG GTRLLARRGG KILNKENLER AREFLDRRGF 
WAIVLARWIP WIRTFAPMIA GAAGMNPRRF ALATTVGALA WVPTLVLAGY YAAGLLTAVP 
WLEAAAVVVS VAFFVIGTGV GVWRYRQEVR KPVDETVEDV AAQR