Gene Amir_6926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6926 
Symbol 
ID8331146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp8057341 
End bp8058090 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID644947357 
ProductSNARE associated Golgi protein 
Protein accessionYP_003104567 
Protein GI256380907 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGAGG TGACGGTCGC GCCCACCACT TCGGTCGCCC TCGGCCCGGA CTGGCTCAAC 
CCCGAGTACC TGCTGAACGG ACTGGGTCCG TACATGCTGG TCGGGTTGTG CTTCATCATC
TTCGCGGAGT GCGGCCTGCT GGTCGGCTTC TTCCTGCCCG GTGACTCCCT GTTGTTCACC
TCGGGCCTCT TCGTCGCGAA CGGACTGCTG GACTACCCGC TCTGGTTGGT CTGCCTGCTC
CTGACCGCGT GCGCGTTCAT CGGCAACGTC GTCGGCTACT GGATCGGCCA CCGCGCAGGC
CCCGCGCTGT TCGCCAAGCC GGATTCCAAG ATCTTCAAGA AGGAGTACGT CGACAAGACG
ACTCAGTTCT TCGACAAGTA CGGCGCCCGC GCGATCGTGA TGGCGCGGTT CGTGCCGATC
GTGCGCACCT TCATCACCGC CATGGCGGGC GTCGGCCGCA TGGACGCCAA GAAGTTCTTC
ACCTACTCCC TGATCGGCGG CGCGGCCTGG GCCGCGGGGC TGACGGTCCT GGGCTACTTC
CTCGGCCAGA TCGAGTTCGT CCGGAACAAC ATCGAGATGA TGCTGATCCT GATCGTGCTG
ATCTCGGTCG TGCCGATCAT CATCGAGTTC GTCAAGGCCC GCCGCGAGAA CAAGACCCTC
GTGCAGGCCG AGGCCGACGA CATCACCCAG CAGTTCCAGC AGGTCTCCGA CCCGGAGGCC
ACGCAGCACA TCCGCCGGAT CGAGGGCTGA
 
Protein sequence
MVEVTVAPTT SVALGPDWLN PEYLLNGLGP YMLVGLCFII FAECGLLVGF FLPGDSLLFT 
SGLFVANGLL DYPLWLVCLL LTACAFIGNV VGYWIGHRAG PALFAKPDSK IFKKEYVDKT
TQFFDKYGAR AIVMARFVPI VRTFITAMAG VGRMDAKKFF TYSLIGGAAW AAGLTVLGYF
LGQIEFVRNN IEMMLILIVL ISVVPIIIEF VKARRENKTL VQAEADDITQ QFQQVSDPEA
TQHIRRIEG