| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6924 |
|---|
| Symbol | |
|---|
| ID | 8331144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 8055363 |
|---|
| End bp | 8056520 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644947355 |
|---|
| Product | N-acetylglucosamine-6-phosphate deacetylase |
|---|
| Protein accession | YP_003104565 |
|---|
| Protein GI | 256380905 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGT GGGGTGGACC GGTGGACGTG ACCCTGGCCG GAGGTCGGGT CGTCACGCCG
GACGGGGTGC TCGACGACGG GTGGGTGGCG GTCCGGGACG GCCGGATCGC GGCGGTGGGC
TCCGGGGCCG CTCCCGAGGG CCCGGTGACC GACCTCGGCG GGGCGCTGCT GGTGCCCGGC
TTCATCGACA TCCACTGCCA CGGGGGCGGC GGTGAGGCGT TCACCAGCGG AGACCCCGAG
AAGGTGCGCA AGGCCGCCGA CGCGCACCGC AGGCGCGGCA CGACGACGAT GCTCGCCAGC
CTGGTGTCCC GGCCGGTGCC GGAGCTGGCC GGGCAGGTCG CCGCGCTGGC CGAGCTGGTG
GACGACGGCG TGGTCGCGGG CGTGCACCTG GAGGGGCCGT TCCTGTCGGC GGCGCGCTGC
GGCGCGCACG ACCCGGCGAT CCTGTGCCCC CCGGACCGGG GCTCGCTGGA CGCGCTGCTG
CGCGCGGGCA GGGGCGCGGT GCGGATGGTG ACGGTGGCGC CGGAGCTGGA GCACGCCGTG
GACGCGGTGC GGCACCTGGT GGAGAACGGC GCGATCGCCG CGATCGGGCA CACCGACGCC
ACCGAGGCGC AGGTGCGGCC CGCCGTGGAC GCGGGCGCGA CGGTCGCGAC GCACCTGTTC
AACGGGATGC GCCCGCTGCA CCACCGCGAG CCGGGACCGA TCGGCGCGCT GCTGGACGAC
GAGCGGGTGA CCGTCGAGCT GATCTGCGAC CTGGTGCACC TGCACCCGAC GACCGTGCGG
CTGGCCGCGC GGCACGCCGG GGCGGGGCGG ACGGTGCTGG TCACGGACGC GATCGCGGCG
GCGGGCGTCG GCGACGGCGT GTACGACATC GGCGGGCTGG AGGTGCGCGT GGTGGACGGC
GTGCCGACGC TGGCGGGCGG CGGTTCGCTC GCGGGCAGCA CGCTGACCAT GGACGCGGCG
TTCCGCAACG CGGTCACCGG CTGCGGGCTG GACGTGGTGG AGGCGGTGCG CGCCACGTCG
GCCAGGCCCG CCGAGCTGCT GGGGCTGGCC GGGGAGACGG GCCGGATCGC CGAGGGCCTG
GCCGCCGACC TGGTGGTGCT GGACGCCGAC CTGCGGCCCC GCGAGGTGAT GAGCCGGGGC
GCCTGGGTGA AAGACTGA
|
|---|
| Protein sequence | MSTWGGPVDV TLAGGRVVTP DGVLDDGWVA VRDGRIAAVG SGAAPEGPVT DLGGALLVPG
FIDIHCHGGG GEAFTSGDPE KVRKAADAHR RRGTTTMLAS LVSRPVPELA GQVAALAELV
DDGVVAGVHL EGPFLSAARC GAHDPAILCP PDRGSLDALL RAGRGAVRMV TVAPELEHAV
DAVRHLVENG AIAAIGHTDA TEAQVRPAVD AGATVATHLF NGMRPLHHRE PGPIGALLDD
ERVTVELICD LVHLHPTTVR LAARHAGAGR TVLVTDAIAA AGVGDGVYDI GGLEVRVVDG
VPTLAGGGSL AGSTLTMDAA FRNAVTGCGL DVVEAVRATS ARPAELLGLA GETGRIAEGL
AADLVVLDAD LRPREVMSRG AWVKD
|
|---|
| |