| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6912 |
|---|
| Symbol | |
|---|
| ID | 8331132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 8045952 |
|---|
| End bp | 8046938 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644947343 |
|---|
| Product | glycoside hydrolase family 16 |
|---|
| Protein accession | YP_003104553 |
|---|
| Protein GI | 256380893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCT CCGAAAGTGG TCACGAACGG ATAACCTCGG AGCGCCGCGC CTTCCCTGAC
CCCGGCGCGG TGACCCTGCA CGAGGAGCAC CACGTGATCA CCAAGCGCGC GGCCGGACGG
GCTGCCGTCC TCGGCGCCGT CCTCTCGGCC GGCCTGTTCG TCGTCGCCAC GTCCACAGCC
GCGCCCGTCG GGCAGCGGGA GAACTGGACC GCGACCACCT CGCCGATCTT CCACAAGACC
ACCTCGCTCA ACGCCATCGG GTCCGTCGCC GACAGCGGCG CGGGCGACGG GCGGGCGCTG
CGGTTGACCC TGAAGTCCGG GGCCAACCCC AGTCCGGGCG GTGGCGTGGA GATCGCCAGC
AACCAGCAGT TCAAGTACGG GACGTTCAGC ACCCGGATGA AGTCGGCGGA CTGCGCCTCC
CAGCCGCGCG CGGGCGTGGT GACCGGGGCG TTCACGTACA GCAGCGACCA CGCCGACCGG
AACGGGAACG GGCTCCCGGA CAACGACGAG ATCGACTTCG AGTGGCTGTG CGCGCAGCCC
GAGGTCGTGT ACCTGACGAT CTGGACGGAC TACAACGCGA GCAACGACCA GCTGCGGAAG
GTCTCGCGGG TCATCGACCT GCGGGCGGGG AAGATCATCT CTACTTGTTT CTCGACGACC
TTCGGCGACT GCGTGCAGCT GAGCGGGGCG GAGAACCAGC CTGCTTCGGT GCCCGCGATT
CCGGGGTACA ACAGCACGAC GCAGTACTAC GAGTACGGGT TCGACTGGAC TGCCGGTGGG
GTGAACTTCT ACCTGGTCAA CGCGCAGGGC GCGCGGGTGA CGCTGTGGGA CTACAAGGGG
CCTGCTTCGC GGGTTCCGAA CAAGCCGAGC ACGTATCTGC AGAATGTTTG GCACACGAAC
AACTGGGACC CGTACGGGTT CCAGGCTCGG GAGCGGCCGA ACCGGGATCT GCACGCGAAC
GTGGACTGGA CCCAGCTGCC TTCGTGA
|
|---|
| Protein sequence | MSSSESGHER ITSERRAFPD PGAVTLHEEH HVITKRAAGR AAVLGAVLSA GLFVVATSTA
APVGQRENWT ATTSPIFHKT TSLNAIGSVA DSGAGDGRAL RLTLKSGANP SPGGGVEIAS
NQQFKYGTFS TRMKSADCAS QPRAGVVTGA FTYSSDHADR NGNGLPDNDE IDFEWLCAQP
EVVYLTIWTD YNASNDQLRK VSRVIDLRAG KIISTCFSTT FGDCVQLSGA ENQPASVPAI
PGYNSTTQYY EYGFDWTAGG VNFYLVNAQG ARVTLWDYKG PASRVPNKPS TYLQNVWHTN
NWDPYGFQAR ERPNRDLHAN VDWTQLPS
|
|---|
| |