Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6906 |
Symbol | |
ID | 8331126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 8040106 |
End bp | 8041251 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644947337 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003104547 |
Protein GI | 256380887 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCCT GCGCGTTGTG CTCACTCACC GAGGAGGCCT CGATGGTGCG GAGTCGGTTG GCAGGGGTGG CGCTGGTGGC GCTCGCGGTG GTGGGCCTGG TGCCCTCGGC CGCGGCGGCG CCGGAGGCGG CGCCCGAGCG GCGTGGTGGC GAGCGGGTGG TCGTGATCGG GCACCGGGGG GCGTCCGGGT ACCGGCCGGA GCACACGCTG GCCGCGTACG AGCTGGCCGC GCGGATGGGC GCCGACTACG TCGAGCCGGA CCTGGTGCCC ACGAAGGACG GGCAGCTCGT CGCCAGGCAC GAGAACGAGA TCGGCGGCAC CACGGACGTG GCCGCGCGCC CGGAGTTCGC CGGTCGGCGG ACCACCAAGT CCGTGGACGG GGTCGCGGTC ACCGGCTGGT TCACCGAGGA CTTCACCCTG GCCGAGCTGA AGGTGCTGCG GGCGAAGGAG CGCATCCCGG AGGTGCGACC GCGCAACACC CTCTACGACG GCCGGTACGA GATCCCGACC TTCCAGGAGG TCGTGGACCT GACCCGGCGG CTGAGCCGCG AGCTGGGCCG GGAGATCGGG ATCTACCCGG AGACCAAGCA CCCCACCCAC TTCCGGGACA TCGGGCTGCC GCTGGAGCCC GCGCTGGTGC GGGCGCTGGA GCGCAACGGG CTGAACAGGC GCGGCGCGAA GGTGTTCGTG CAGTCGTTCG AGGTGGCGAA CCTGAAGGCG CTCAGCCGGT CGCTGCGGGT GCCGCTGGTG CAGCTGGTGA ACGCGTCGGG CGCGCCGTAC GACTTCGTGA AGGCCGGTGA CCCGCGCACC TACCGCGACC TGGTGACCCC CGACGGGCTG GAGGAGGTCG CCCGGTACGC GTCCGGGGTG GGGCTGGCCA AGGACGTGGT GCTGCCCAGG GACGCGGGCG GGTTCCTGCT GCCGGGGACG CCGGTGGTGC GGGACGCGCA CGCGCGCGGG CTGCTCGTGC ACGTGTGGAC GTTCCGCAAC GAGAACGCGT TCCTGCCCGC CGACCACCGC TCGTCGACCG ACCCGGCCGC GTACGGGCGG GCGTTCGAGG AGTACGCGCG GTTCCTGGTG ACCGGGGTCG ACGGGGTGTT CGCCGACAAC CCGGACACCG CGGTGGAGGC CGTGCGCGGG CGCTGA
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Protein sequence | MLPCALCSLT EEASMVRSRL AGVALVALAV VGLVPSAAAA PEAAPERRGG ERVVVIGHRG ASGYRPEHTL AAYELAARMG ADYVEPDLVP TKDGQLVARH ENEIGGTTDV AARPEFAGRR TTKSVDGVAV TGWFTEDFTL AELKVLRAKE RIPEVRPRNT LYDGRYEIPT FQEVVDLTRR LSRELGREIG IYPETKHPTH FRDIGLPLEP ALVRALERNG LNRRGAKVFV QSFEVANLKA LSRSLRVPLV QLVNASGAPY DFVKAGDPRT YRDLVTPDGL EEVARYASGV GLAKDVVLPR DAGGFLLPGT PVVRDAHARG LLVHVWTFRN ENAFLPADHR SSTDPAAYGR AFEEYARFLV TGVDGVFADN PDTAVEAVRG R
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