Gene Amir_6882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6882 
Symbol 
ID8331102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp8018744 
End bp8019403 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content78% 
IMG OID644947313 
Productdeacetylase-like protein 
Protein accessionYP_003104523 
Protein GI256380863 
COG category[R] General function prediction only 
COG ID[COG3233] Predicted deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCGC GCCTGGTGGT GTCGCTGTCG GGGATCGGCT CCGCACCGGT GGGGCCGAGC 
TCGGAACTGG CCGGTGAGCT GGGTCGCCGG GGTGTTCCGC TGTCGTTGTT GCTCGCGCCC 
GCGCACGTCC GGCGGGGCGA GGCGCTGGAC TGGGTGCGGT CGCGGCTGGA CGGGGGCGAC 
GCGCTCGTGC AGCACGGGTT CGACCACCGC GACGACCCGT TCGCGCTGCG CAGGCGCGCC 
GAGTTCGCGG TGCTGCCCGC GCACGAGGCC GGGCTGCGGC TGGTGGCCGC CCGCGCCGCG 
TTCGCCCGCC ACGGCCTGGC CACCGACGTG TTCGCGCCGC CGTCCTGGGT GGTCTCGCCC 
GGCGCGCTCC TCGCGCTGGC CAGGCACCGG TTCGCGGTGT GCGCCGACCT CGCGGGCGTG 
CGGGACCTGC GCACCGACCG GTACGTGGAG AGCCGGGTGC GCGGTGGTGG CCCCAAGGGG 
CTGGCCGCCG CGCTGCGCCG GGGCGGGGTG GTGCGGATCG GCGTCGACGC GGCCGACCTG 
CCGGGGCTGC GCGGCGCGGT GCTCGGCGCC GTGGACGTCG TGCTGGCCCA CGGCGCCGAC 
CCGACGACCT ACGCCGACCT GATGACCGGG TCAGACCTCG GTCGGCTCAC CCGGCGCTAG
 
Protein sequence
MVARLVVSLS GIGSAPVGPS SELAGELGRR GVPLSLLLAP AHVRRGEALD WVRSRLDGGD 
ALVQHGFDHR DDPFALRRRA EFAVLPAHEA GLRLVAARAA FARHGLATDV FAPPSWVVSP 
GALLALARHR FAVCADLAGV RDLRTDRYVE SRVRGGGPKG LAAALRRGGV VRIGVDAADL 
PGLRGAVLGA VDVVLAHGAD PTTYADLMTG SDLGRLTRR