| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6835 |
|---|
| Symbol | |
|---|
| ID | 8331055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7972668 |
|---|
| End bp | 7973510 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644947267 |
|---|
| Product | aminotransferase class IV |
|---|
| Protein accession | YP_003104477 |
|---|
| Protein GI | 256380817 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGC TCGCACTGCT CGACGGAACC CTCGCGGACC CCGACGCCCC GCTCATCCGG
ATCGACGACC TCGGCCTCGT GCGCGGTGAC GGGATCTTCG AGACGATCCT CGTCGTCGAC
GGCAAGCCCA GGGAGCTCGG TCCCCACCTC GACCGCCTGG AGCGGTCGGC GGCCATGCTC
GACCTGCCCG CGCCGGACCG CGCGGGCTAC GAGCGGGCGG CGAAGGCGGT GCTGGACAAC
TGGTCCGGCA GCGCCGAGAT GGCGCTCAAG CTCGTCATGA CCCGAGGCGT CGAGGGCGGC
GACGGCACGC CCACCGGCTT CGCGCTCGGG CTGGAGATCT CGCCGAAGGT GCTCGCGCAG
CGCGCGGAGG GCATCGCGGC GGTCACCCTG GACCGGGGGA TCGAGCCGGG CCTCGCCGAG
CGCGCCCCGT GGCTGCTGCT CGGCGCGAAG TCCCTGTCGT ACGCGGTGAA CATGGCCGCG
CTGCGCGAGG CGGAGCGCAG GGGCGCGGCG GAGGTGGTCT TCACGACCTC CGGCGGCTCG
GTGCTGGAGG GCCCGACGTC CACCCTGATC GCGGTGCGCG GCCGGACCCT GACCACGCCG
CCCGCGACGC TGGGCATCCT GCCCGGCACC ACCCAGGCGG TGCTGTTCCA GGCCGCCGAG
CAGGCCGGGT GGACGGTCGT CGTCGAGCCG ATCGCCGCCG AGGACCTGTT CACCGCCGAC
GCGGTGCTGC TGGTGTCGAG CGTCCGCTCG ATCACCCGCG TGCACACCCT GGACGGCAGG
GCGCTGCCCG ACTCGACCGC GCTGCACGCC GAGCTGCACG CGCTCTACGA GTCCCAGTAC
TAG
|
|---|
| Protein sequence | MRVLALLDGT LADPDAPLIR IDDLGLVRGD GIFETILVVD GKPRELGPHL DRLERSAAML
DLPAPDRAGY ERAAKAVLDN WSGSAEMALK LVMTRGVEGG DGTPTGFALG LEISPKVLAQ
RAEGIAAVTL DRGIEPGLAE RAPWLLLGAK SLSYAVNMAA LREAERRGAA EVVFTTSGGS
VLEGPTSTLI AVRGRTLTTP PATLGILPGT TQAVLFQAAE QAGWTVVVEP IAAEDLFTAD
AVLLVSSVRS ITRVHTLDGR ALPDSTALHA ELHALYESQY
|
|---|
| |