Gene Amir_6832 details

Gene Information

• Locus tag: Amir_6832
• ID: 8331052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7970839
• End bp: 7971441
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644947264
• Product: Allophanate hydrolase subunit 1
• Protein accession: YP_003104474
• Protein GI: 256380814
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG2049] Allophanate hydrolase subunit 1
• TIGRFAM ID: [TIGR00370] conserved hypothetical protein TIGR00370

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTGA GGCGGTGCGG CTCCGACGCG GTGCTCGTCG AGGTGGGCTC GCTGGACGAG 
GTCGCCGCGG TGCGCGCGGC GGTGCGGGCC GCCGACCTGC CGCAGGTCGC CGAGGTCGTC 
CCGGCCGCCC GGACGGTGCT GGTCAAGGCC ACGCCCGGCG GGCTGGGGGC GGTGCGCGAG 
CTGCTCGACC GCGTCGACCT GTCGGCGCCC GCCCCGGCGC CCGCGCGGGA GGTCGTGCTG 
CCGGTCCGCT ACGACGGGCC GGACCTGGAG CTGGTCGCGG AGACGGCGGG CCTGGCGGTG 
GACGAGGTCG TCGCGCTGCA CGCCGGGGCC GCGTACGAGG TGGCGTTCTG CGGGTTCGCG 
CCCGGCTTCG GCTACCTGAC CGGCCTGCCG GAGCCGCTGC GGCAGGCGAG GCTGGACTCG 
CCGAGGACGC GCGTCCCCGC CGGGGCGGTC GCCGTGGCGG GCGAGTTCAC CGCCGCCTAC 
CCGAGGGCCA CGCCCGGCGG GTGGCGGCTG ATCGGCACGA CGGACGCGCC GCTGTTCGAC 
CCTGGGCGGG ACGAACCGGC GCTGCTGGCT CCCGGTGACC GGGTGCGCTT CGAGGCGGTG 
TGA 

 

Protein sequence

MRLRRCGSDA VLVEVGSLDE VAAVRAAVRA ADLPQVAEVV PAARTVLVKA TPGGLGAVRE 
LLDRVDLSAP APAPAREVVL PVRYDGPDLE LVAETAGLAV DEVVALHAGA AYEVAFCGFA 
PGFGYLTGLP EPLRQARLDS PRTRVPAGAV AVAGEFTAAY PRATPGGWRL IGTTDAPLFD 
PGRDEPALLA PGDRVRFEAV