Gene Amir_6820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6820 
Symbol 
ID8331040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7961301 
End bp7962359 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content69% 
IMG OID644947252 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_003104462 
Protein GI256380802 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACC GCACTGCGGC GCAGCGCCCC GCGGGCACCG GGACCCATCC CGGTGCCCGC 
GGGGGCGTCC CGGCCGCTCG ACCAGCCCCG GAGGCTCCGA TTCCCCCCAC CTCGGAAGGC
GAGAAGAAGG CGCACGTCCG GCCAGGTGAC CGGATCTTCA GCGGGCTCGC CACCGGTTCC
GGCGTCCTCG TCGTGGTGCT CATCGCGGCG ATCGGCGTGT TCCTGCTCAT GCAGGCCGTC
CCGTCACTCG CGCTGAACAA CGCGAACTTC CTGACCAGCC GCGAGTGGTC CACCGGCGAT
GTCGGCGACA TGCGCTTCGG CATCCTGGAC CTGCTCCTGG TCACCGTGGT CGCCTCGCTC
GTGGCGCTGG CGATCGCCAT GCCGATCGCG CTGGGCATCG CCCTCTTCCT CACCCAGTAC
GCCCCGCGCA AGCTGTCGCG GACGTTCGCC TACGTCATCG ACCTGCTCGC CGCGGTCCCC
TCGATCATCT TCGGCCTCTG GGGCCTGTTC ATCCTGGGGC CGGTGCTCAC GCCGATCGGC
GAGTTCCTGA CCGACAAGCT CGGCTGGATC TTCCTGTTCT CGCAGGGCAA CGTGTCCATC
GAGCTGGGCG GCACGATCTT CACCGCGGGC ATCGTCCTCG CCGTGATGAT CCTGCCGATC
ATCACCGCCG TCAGCCGCGA GGTCTTCGAC CGCACCCCGC CCGCGCACGT CGAGGGCGCC
ATCGCGCTCG GCGCGACCAA GTGGGAGGTC GTCAAGACCA CCGTCCTGCC GTTCGGCAAG
GCCGGTTACG TCAGCGCCTC GATGCTCGGC CTCGGCCGCG CGCTCGGCGA GACCATCGCG
CTGACGATCA TCCTCAGCTC CACGGCCCAG GCGTTCGGCT GGAGCCTGTT CGACGGCGGC
GCCACGTTCG CCTCGAAGAT CGCGCTGGCC GCGCCCGAGT TCAACGACCC GAAGTCGGCG
GGCGCCTACG TCGCCGCGGG CCTGGTGCTG TTCGTCCTGA CCTTCGTGGT CAACGCGATC
GCCCGGTCCA TCGTCGCCGG TCACAAGGAG TACGAATGA
 
Protein sequence
MNDRTAAQRP AGTGTHPGAR GGVPAARPAP EAPIPPTSEG EKKAHVRPGD RIFSGLATGS 
GVLVVVLIAA IGVFLLMQAV PSLALNNANF LTSREWSTGD VGDMRFGILD LLLVTVVASL
VALAIAMPIA LGIALFLTQY APRKLSRTFA YVIDLLAAVP SIIFGLWGLF ILGPVLTPIG
EFLTDKLGWI FLFSQGNVSI ELGGTIFTAG IVLAVMILPI ITAVSREVFD RTPPAHVEGA
IALGATKWEV VKTTVLPFGK AGYVSASMLG LGRALGETIA LTIILSSTAQ AFGWSLFDGG
ATFASKIALA APEFNDPKSA GAYVAAGLVL FVLTFVVNAI ARSIVAGHKE YE