| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6811 |
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| Symbol | |
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| ID | 8331031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7949037 |
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| End bp | 7950218 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644947243 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_003104453 |
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| Protein GI | 256380793 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.394979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACGGC GGGCGGGAGC TGGGGCTGCG GCTAGCCTGG TCGGCGTGGC AGCTCCCCCT
CCCTCGCTGA AGATCGGCCG GTACTCGGTC GACCCGGCCG TCGTGCTCGC GCCGATGGCG
GGCATCACGA ACATCGCCTT CCGGCAGCTG TGCCGGGAGT TCGGGAGCCC CGGCTCGCTC
TACGTCTGCG AGATGATCAC CGCCCGCGCC GTGGTGGAGC GCGACTCCAA GACCATGGAG
ATGCTGGCGT TCGGCCCCGA CGAGCACCCC CGCTCGATGC AGCTCTACAG CGTCGACCCG
GTGTCCATGT CCGAGGCCGT CAAGCTGATC ACCGGCGAGG ACCGGGCCGA CCACATCGAC
ATGAACTTCG GCTGCCCCGT CCCCAAGGTC ACCCGCAAGG GCGGTGGGGC GGCGCTGCCG
TACAAGCGGA AGCTGTTCCG GGAGATCGTG CGGGCCGCCG TGCGCGCCGC CGAGCCCGCG
GGCGTTCCGG TGACCGTGAA GTTCCGCATC GGCATCGACG ACGAGCACCT CACCTACCTG
GACGCGGGCC GCATCGCCGA GGACGAGGGC GCGCAGGCCG TCGCGCTGCA CGCCCGCACG
GCCGCGCAGC GCTACTCCGG CACCGCCGAC TGGTCGGCCA TCACCCGGCT GAAGGAGGCG
GTGACCTCCA TCCCGGTGCT GGGCAACGGC GACATCTTCA GCGCCAGGGA CGCCCTCGAC
ATGGTCGCCC GCACCGGCTG CGACGGGGTC GTCGTCGGCC GGGGCTGCCT GGGCAGGCCG
TGGCTGTTCG GCGAGCTGCA GGCCGCCTTC CGGGGCGAGC CGCTGCCCGC GCCGCCGACG
CTCGGCAAGG TCGCCGACAT CCTCTGGCGG CACGGCGCCC TCCTCGCCGA CCACCTCGGC
GAGGAGAAGG GCGTCCGCGA CCTGCGCAAG CACATGGCCT GGTACCTGAA GGGCTTCCCG
GTGGGCGGCG ACCTGCGCCG GTCGCTGGCG ATGGTCAGCA CGCTGGCCGA GCTCCAGGAC
CTGGTCGGCC TGCTCGACCG GACCGCCGAG CACCCCTCCG ACGCGGACGG CCCCCGAGGC
CGCCAGGGTT CCCCCGCTCG GGTGATCCTG CCGGAGGGCT GGCTGGACGA CCCGGAGGAC
GCCGCGGTGC CCGAGGCCGA GGAGATGCAC TCGGGTGGCT GA
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| Protein sequence | MERRAGAGAA ASLVGVAAPP PSLKIGRYSV DPAVVLAPMA GITNIAFRQL CREFGSPGSL
YVCEMITARA VVERDSKTME MLAFGPDEHP RSMQLYSVDP VSMSEAVKLI TGEDRADHID
MNFGCPVPKV TRKGGGAALP YKRKLFREIV RAAVRAAEPA GVPVTVKFRI GIDDEHLTYL
DAGRIAEDEG AQAVALHART AAQRYSGTAD WSAITRLKEA VTSIPVLGNG DIFSARDALD
MVARTGCDGV VVGRGCLGRP WLFGELQAAF RGEPLPAPPT LGKVADILWR HGALLADHLG
EEKGVRDLRK HMAWYLKGFP VGGDLRRSLA MVSTLAELQD LVGLLDRTAE HPSDADGPRG
RQGSPARVIL PEGWLDDPED AAVPEAEEMH SGG
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