Gene Amir_6809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6809 
Symbol 
ID8331029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7947405 
End bp7947941 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID644947241 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003104451 
Protein GI256380791 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.318139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGACAT CACCCGATCA GCGGCGAGAG CGCTACATGC GCGCGGCGGT GTCCTGCTTC 
GCCCGGTACG GCTACCGGCG GACCTCCATG GACGCCATCG CCGCAGCCGC GGACGTCTCC 
CGGCCCGCGT TGTACCAGTA CTACCGGGGC AAGGAGGAGA TCTTCCGGGA GGCCGTGCAG 
TGGGCGCTGG AGGTTTTCCT GGAACGGGCC GAGGTCGCCG CGCGGGGGCC CGGTGGGGTG 
GCCGAGCGGT TGACCGCGGT GCTCGGGCTG GTGCTGCGGA TGCACGCGGG CGAGGTGTTC 
CAGGCCGAGC TGATCGACGA GACGCAGCAG CGGGCGGTCG AGCAGTGGAC GCTCTTCGAG 
CGGCGGATGA TCGAGGTCCT GGAGGGCGTG CTGGGGCCGT GCGCCGGGGT GGACGAGGTG 
GCCGGGGTGC TGTTCTACGG GGTCAAGGGG ATCACGCTGC ACCTGGGCGG CGTCGAGCGG 
CAGGAGGTGC TGCTGCGCCG TCTGGTGGAG CTGACCGTTC GGGGGCTGAC AACCTGA
 
Protein sequence
MATSPDQRRE RYMRAAVSCF ARYGYRRTSM DAIAAAADVS RPALYQYYRG KEEIFREAVQ 
WALEVFLERA EVAARGPGGV AERLTAVLGL VLRMHAGEVF QAELIDETQQ RAVEQWTLFE 
RRMIEVLEGV LGPCAGVDEV AGVLFYGVKG ITLHLGGVER QEVLLRRLVE LTVRGLTT