Gene Amir_6782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6782 
Symbol 
ID8330998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp7914315 
End bp7914992 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID644947211 
ProductABC transporter related 
Protein accessionYP_003104425 
Protein GI256380765 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCCCC TGCTCGAAGC CGTCGACCTG CGCAAGTCCT TCGGCCCGAC CCCCGCGCTC 
GACGGCGCCG GTCTGGCCGT CCACGCGGGC GAGGTGCTGG CCATCATGGG GCCGTCCGGC 
TCCGGCAAGT CCACCCTGCT GCACTGCCTC GCGGGCATCC TCCAGCCGGA CGGCGGCACG 
GTCCGCTACC GCGACGTGGA GCTGAGCGCG CTGGCGGACG GGGCGCGCAG CGAGCTGCGG 
CGCACCGACT TCGGCTTCGT GTTCCAGTTC GGGCAGCTGG TGCCCGAACT GTCCTGCCTG 
GAGAACGTGG CGCTCCCGCT GCGCCTGGGC GGCGTGAAGC GCAAGGCCGC CGAGTCCAGG 
GCGCGCGAGT GGCTGGAGCG CCTGGAGGTC GACGGCGTCG CGGACAAGCG GCCCGGCGAG 
ACCTCCGGCG GCCAGGCCCA GCGCGTCGCC GTGGCGCGCG CGCTGGTCAC CGGCCCGAAG 
GTGGTGTTCG CCGACGAGCC GACCGGCGCG CTGGACTCGC TCAACGGCGA GCGCGTGATG 
CAGTTCCTGG TCACGGCCGC GCGCGAGACC AACGCGGCCG TCGTGCTGGT CACCCACGAG 
GCGCGGGTCG CCGCCTACTC CGACCGCGAG GTCGTCGTGC GCGACGGCAA GTCCCGCGAA 
GTGGAGCGCG TTCGGTGA
 
Protein sequence
MRPLLEAVDL RKSFGPTPAL DGAGLAVHAG EVLAIMGPSG SGKSTLLHCL AGILQPDGGT 
VRYRDVELSA LADGARSELR RTDFGFVFQF GQLVPELSCL ENVALPLRLG GVKRKAAESR 
AREWLERLEV DGVADKRPGE TSGGQAQRVA VARALVTGPK VVFADEPTGA LDSLNGERVM 
QFLVTAARET NAAVVLVTHE ARVAAYSDRE VVVRDGKSRE VERVR