Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6745 |
Symbol | |
ID | 8330961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7878310 |
End bp | 7879170 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644947174 |
Product | Proline dehydrogenase |
Protein accession | YP_003104388 |
Protein GI | 256380728 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.989214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACCGC CCCGCGCGCT GCTCCCGTCC GCCGCGCGCA GGTTCGCGGC CGGCCTGACC GGCTCCGACG CCGTCGCCAC CGCCACCTCG CTGGTCGACC TGGGCTTCCG GGTGACCCTG GAGCACTGCG CGGGCCCCTC GGCCGACCGG GAGTCCGCCG AGTCCTCGGT CCAGGCCGAC CTGGAGCTGC TCGACCTGCT GCACGCCACC GGCCTGGCCT GCGACACCGA CGTGGCCGTG CCGCTCAGCG CCGTCGGCCT GCTCGTGGAC GAGCGCCTGG CCCTGGACAA CGCCTCCCGC CTCGCAGCCG CAGCCGCCCA GTGCGGCACC ACGGTCACCC TGGAGGCCGA CGACCACGTG GACGTCGACG CCCTCCTGCG CGTCCTCGGC GAGGTGCGCC GCGAGTGGCC GGGCACCGCC GTGGCAGTGC GGGCCGCGCT GCTGCGCGCC GAGGAGGACT GCGCGGCGCT CGCGGGCAGC CGCGTCCGAC TTGACCGGGG CGGCCCGCGC GAGCCGGGCT CGGTGGCCCG CACCGACCCG CACGCCGCCG ACCTGGCCTA CGTGCGCTGC CTGAACCTCC TGCTGGAGGC GGACGGCGCC CCGGTGTTCG CCACGCACGA CCCGAGGCTG CTGGAGATCG CGGGCGAGCG CGCCCGCTGG TTCGGCCGGG ACCCCGGCGA GTACGAGCTG CAACTGCCGC TGGGCGTGCG CACGGCGGAG CGGGACCGGT TGGCGGCAGC GGGCGACGTG GTGCGCGTGC GCGCCCCGTA CGGCCCGGCG TGGGCCGACC GCCTGGACCG GGTGGTCGAG CGCCCGGCCG ACGTCGCGCT CCTGCTGCGC GGCCTGGTCG GCCGCGCGTG A
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Protein sequence | MKPPRALLPS AARRFAAGLT GSDAVATATS LVDLGFRVTL EHCAGPSADR ESAESSVQAD LELLDLLHAT GLACDTDVAV PLSAVGLLVD ERLALDNASR LAAAAAQCGT TVTLEADDHV DVDALLRVLG EVRREWPGTA VAVRAALLRA EEDCAALAGS RVRLDRGGPR EPGSVARTDP HAADLAYVRC LNLLLEADGA PVFATHDPRL LEIAGERARW FGRDPGEYEL QLPLGVRTAE RDRLAAAGDV VRVRAPYGPA WADRLDRVVE RPADVALLLR GLVGRA
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