Gene Amir_6735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6735 
Symbol 
ID8330951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7868225 
End bp7869736 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content77% 
IMG OID644947164 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_003104378 
Protein GI256380718 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCGCTC CCGCCCGCAA CGTCGCAGAC CTGGTGCGCG AGTCCGCGCG CAGGGGACCG 
GGACACCCGG CCGTGGTCGA CGTCACCACC GCGCGGAGCC TGAGCTGGGG CGCGCTCGAC
GCGGCGGTGG ACGCGGAGGC CCGAAGGCTC GTGGGCGCGG GGCTGCGGCC CGGCGACCGG
GTCGCGGTGC GGCTGCCGAC CGGTCCGGCG TTCTGCGCGG CGGTGTTCGG CGCGCTGCGC
GCGGGCGGCG TCCTGGTGCT GCTGGGCGCG GGCCAGCCGC GTCGCGAGCT GGACCGGCTG
CTGGCCGACA GCGGCGCGCG GCTGCTGGTC GGCGACCCGG ACGAGCCGGG CGCCGAGCCG
GGTGGGCCGC TGGACCCCCA GGTCGCCGTG CTGCCCGAGC CCTCGCTGGA CGTCGAGGCG
GGCTCGGGGG AGCCGGTCGA CGCGGTCCGG GGCGGCGAGG ACGTCGCCGT GATCGGCTAC
ACCTCCGGCA CCTCGGGCGT GCCGCGCGGC GCGATGCTGT CGCACCGGGC GCTGCTGGCC
AACGTCGACC AGTGCGCCGA GCTGCGGCCC GCCCCGGTGA CCGCCGGGGA CCGGGTGCTG
CTCGCGCTGC CGCTGTTCCA CGTCTACGGG CTCGGCCCCG GCCTGCTCCA GGTCGCGGGC
GCGGGGGCCA CCGCCGTGCT GGTCGAGCGG TTCGACCCGG ACGCGGCGCT CACCGCGATC
CGCGAGCACC GGGTGACCGC GCTGGTCGGC GTGCCGCCGA TGTACCGGGC GCTGCTGGCC
CAGCCGGTGG CGCGGCTGCG CGCGGACCTG GCGACCGTGC GCCTGTTCAC CTCCGGCGCG
GCCCCGCTGC CGCCCGAGGT GCTGACCGGG ATGCGCGCCG CGACGGGCCT GGTCGTGCAC
GAGGGCTACG GCCTGACCGA GACCGGTCCC GTGCTGACGT CCTCGCTGGT CACGGGCACG
GCGAAGCCGG GGTCGGTGGG CAGCCCGCTG CCCGGCGTCG AGCTGCGCCT GGTCGACAGC
GACGGCTCCC CGCTCGACCT GGAGGAGGAC GAGCCGGGCA CCGGCCTGGT GTCGGTGCGC
GGCGCGAACC TGTTCAGCGG CTACTGGCCG GACGGCGCGC ACGGCCCGGC CGAGGACGGC
TGGTTCCGCA CCGGCGACGT CGGCTACCTG GACGCGGACG GTGACCTGCA CCTGGTCGAC
CGGGCGGGCG ACCTGATCAT CGTCAACGGG TTCAACGTCT ACCCGCACGA GGTGGAGGCG
GTGCTGCGCG AGCTGCCCGG CGTGGTGGAG GCGGCGGCGG TGGGCGTGCC GGACGAGCGG
ACCGGCGAGG CGGTCAAGGT GGTGCTGGCG CTGGCGGACG GGGTCGAGCT GGACGAGGCG
CGGGTGCGCG GGCACTGCGC GGACCGGCTG GCGAAGTTCA AGGTCCCGAC CTCGGTGGAG
TTCACCTCGG CGCTGCCGCA CTCGCCGACC GGCAAGGTCG CGAGGGCCCT GCTCCGACCG
CCGCTGATCT GA
 
Protein sequence
MVAPARNVAD LVRESARRGP GHPAVVDVTT ARSLSWGALD AAVDAEARRL VGAGLRPGDR 
VAVRLPTGPA FCAAVFGALR AGGVLVLLGA GQPRRELDRL LADSGARLLV GDPDEPGAEP
GGPLDPQVAV LPEPSLDVEA GSGEPVDAVR GGEDVAVIGY TSGTSGVPRG AMLSHRALLA
NVDQCAELRP APVTAGDRVL LALPLFHVYG LGPGLLQVAG AGATAVLVER FDPDAALTAI
REHRVTALVG VPPMYRALLA QPVARLRADL ATVRLFTSGA APLPPEVLTG MRAATGLVVH
EGYGLTETGP VLTSSLVTGT AKPGSVGSPL PGVELRLVDS DGSPLDLEED EPGTGLVSVR
GANLFSGYWP DGAHGPAEDG WFRTGDVGYL DADGDLHLVD RAGDLIIVNG FNVYPHEVEA
VLRELPGVVE AAAVGVPDER TGEAVKVVLA LADGVELDEA RVRGHCADRL AKFKVPTSVE
FTSALPHSPT GKVARALLRP PLI