Gene Amir_6732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6732 
Symbol 
ID8330948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp7865360 
End bp7866010 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content71% 
IMG OID644947161 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003104375 
Protein GI256380715 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAACA GCAAGCTCGC CCTCGTCGGA ACCGCGCTGG TCGCGTCCCT GGCCCTCACC 
GCCTGCGGAG GCAGCGGGGA CACCGCGTCG ACGAGCAGCG CGCCCGCCGC CTCGTCGTCC 
ATGCCCATGA CCCAGATGAG CAGTGCGGAC GGCGCCACGA AGACCACGGA CGTGTTCGGC 
CCCGGCTGCG CCAGCGTCCC GCAGGACCCG TCCAACAAGG GCTCCCTGGA GGGCATGGTC 
ACCGACCCGG TGGCCACCGC CGCCAGCAAC AACCCGCTGC TCACCAAGCT GGTCACCGCC 
GTGAAGGCGG CGAACCTGGT CGACACGCTC AACGCGCAGA CCGCGATCAC CGTGTTCGCG 
CCCGCCGACC CGGCGTTCGA GGCGCTCGGC GAGGCGAAGT TCCAGGAGCT GGCGTCCAAG 
CCGGAGGAGC TGGCCAAGGT CCTGCAGTAC CACGTGGTCG GCAAGCGCTA CGACGCCGAG 
GGCCTGGAGG CCGCGGGCAC CGTCAAGGCG CTGACCGGCG AGGAGCTCAA GGTCACCGGC 
TCCGGCGAGT CGATGATGGT GAACGACGCG AAGGTCCTGT GCGGGAACAT CCCGACCAAG 
AACGCCACCG TGTTCGTGAT CGACACCGTG CTGACCCCGC CCGCCGCCTG A
 
Protein sequence
MRNSKLALVG TALVASLALT ACGGSGDTAS TSSAPAASSS MPMTQMSSAD GATKTTDVFG 
PGCASVPQDP SNKGSLEGMV TDPVATAASN NPLLTKLVTA VKAANLVDTL NAQTAITVFA 
PADPAFEALG EAKFQELASK PEELAKVLQY HVVGKRYDAE GLEAAGTVKA LTGEELKVTG 
SGESMMVNDA KVLCGNIPTK NATVFVIDTV LTPPAA