| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6730 |
|---|
| Symbol | hemA |
|---|
| ID | 8330946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7862962 |
|---|
| End bp | 7864278 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644947159 |
|---|
| Product | glutamyl-tRNA reductase |
|---|
| Protein accession | YP_003104373 |
|---|
| Protein GI | 256380713 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0373] Glutamyl-tRNA reductase |
|---|
| TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCC TCGTCGTGGG GCTGTCCCAC CGGACCACAC CGGTGCCCGT GCTGGAGCGC
GCGGCCGTCG CCGACCTGCC CAAGGTCCTC GGCCAGCTGC TCGCCGCCCC CAGCGTCTCC
GAGGCCGTGC TGCTCTCGAC CTGCAACCGG GTCGAGGTGT ACGCCGTCGT CGAGACCTTC
CACGGTGGCA TGAACGAGGT CGTCGAGGTG CTCGCCCGCC AGTCGGGCGT GGACACCGCC
GAGCTGTTCG AGCACCTGTT CGTCCACTAC GCGGGCGCCG CGGTGGACCA CCTGTTCTCC
GTGGCCGCAG GCCTGGACTC GATGGTCGTG GGCGAGGCCC AGATCCTCGG CCAGCTGCGC
GCCGCCTACG CCGCCGCCGA CGAGGTGGGC GTGGTCGGCC GCGCGCTGCA CGAGCTCGTC
CAGCAGGCGC TGCGCGTGGG CAAGCGGGTG CACAGCGACA CCGGCATCGA CCACGCGGGC
GCGTCCGTGG TGTCCGAGGC GCTCGCCGAC GCCGAGCAGG CGCTCGGCGG CCTGGCGGGC
AAGCGGGCCC TGATCGTCGG CGCGGGCTCC ATGGGCGGTC TCGCCGTGGC GCACCTGCGC
CGCGCGGGCA TCGGCTCGGT CGCCATCGCC AACCGCACCG CCGCCAACGG CGCCCGCCTC
GCCGAGGCGC TGCGCGCCGA GGGCGTGCCC GCCGAGTCGG TGGGCCTGGA CACCCTGTTC
GACGAGGTCG CCGCGGCCGA CGTGCTGTTC GCCTGCACCG GCTCGATGGA GCTCACCGTC
GGCGCCGAGG CCATCGGCGA CCGCGCGCCC GACCGGCCGC TGGTCGTCTG CGACCTCGGC
CTCCCCAAGG ACGTCGACCC CGCCGCCGAA CTGCTGGCGA ACGTGCGGGT GGTCGACCTG
GAGACCCTGC AGCGCAGGCT GTCCGACGCC CCGACCGGGC AGGACGCCCA GCGCGCGGCG
GAGATCGTCG CCGAGGAGGT CCGCGCCTAC CTGGCCGGGC AGCGCTCGGC CGAGGTCACG
CCCACCGTCA CGGCCCTGCG CAAGCGCGCC GCCGAGGTGG TCGACTCCGA GCTGCTGCGG
CTCGACTCCC GGCTGCCCGA GCTGGACGGC GCGGTGCGCG CCGAGCTGGC CAAGACGGTC
CGCCGGGTGG TCGACAAGCT GCTGCACACG CCGACCGTGC GGGTCAAGCA GCTGGCCGCC
GGGCCGGGCG GCGCGGGCTA CGCCGAGGCG CTGCGCGAGC TGTTCGGCCT CGACCCGCAG
GCGCCCGCCG CGGTCAGCAC CCCCCAGTCC CCGCAACACA AAGGTGAGAT GCGGTGA
|
|---|
| Protein sequence | MSLLVVGLSH RTTPVPVLER AAVADLPKVL GQLLAAPSVS EAVLLSTCNR VEVYAVVETF
HGGMNEVVEV LARQSGVDTA ELFEHLFVHY AGAAVDHLFS VAAGLDSMVV GEAQILGQLR
AAYAAADEVG VVGRALHELV QQALRVGKRV HSDTGIDHAG ASVVSEALAD AEQALGGLAG
KRALIVGAGS MGGLAVAHLR RAGIGSVAIA NRTAANGARL AEALRAEGVP AESVGLDTLF
DEVAAADVLF ACTGSMELTV GAEAIGDRAP DRPLVVCDLG LPKDVDPAAE LLANVRVVDL
ETLQRRLSDA PTGQDAQRAA EIVAEEVRAY LAGQRSAEVT PTVTALRKRA AEVVDSELLR
LDSRLPELDG AVRAELAKTV RRVVDKLLHT PTVRVKQLAA GPGGAGYAEA LRELFGLDPQ
APAAVSTPQS PQHKGEMR
|
|---|
| |