| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6703 |
|---|
| Symbol | |
|---|
| ID | 8330919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7839546 |
|---|
| End bp | 7841162 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644947132 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_003104346 |
|---|
| Protein GI | 256380686 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA CAGTTCCCCT GAGGGGGAAG CTCGCCACCG GCGTCGCGCT CGCGTCGTCG
CTGCTGCTGC TCAGCGGGGT CGCGGGCGCC GCGGCGCCGG GCGCTCCGGG CATCGGAGAC
CCCTACTTCC CGAAAGCCGG GAACGGCGGG TACGACGTGT CGCACTACGA CATCCGGTTG
AAGTACGAAC CGGGAACCGA TCGGCTTTCC GGAACGACGA CGGTCCTGGC TCGGACGACC
GAGGAGTTAT CGGCGTTCAA CCTGGACTTC CTGCTGGACG TCACCTCCGT CCGGGTGAAC
AACCGCGTCG CCGCGCACTC CGGGACGCCG GACGGCGAGC TGACCGTCAC GCCGGGCGTC
GTGCTCCCGG CCGGGACCGA GCTGACGATC GTGGTCGCGT ACTCGGACGT CCCGTCGCGG
CACGCCGTCG ACGGCTTCAC CGGCTGGAAG CGCACCCCGG ACGGCGCGCT CGCGATCGAC
CAGCCGGACA TCGCGCCCTG GTGGTTCCCG AGCGACAACC ACCCGAGGGA CAAGGCCACG
TTCGACGTGT CGGTGGCCGT GCCGGACGGG GTGGAGGTGC TGTCGAACGG GCTGTACCAG
GGCACGGTCA AGCAGATCGA CGGCTGGACG CGGTGGCGGT GGCGCGAGCT GGAGCCGCAG
GCCACCTACC TGGCGTTCGT CGCGATCGGG CAGTTCGAGG TGCGGCACTC GCTCGCGCCG
AGCGGGCAGG CGTCGGTGAC GGCGTACTCG GAGCGGCTGG GCGCGGACGG CCCGGCGGCG
CGGGCGAGCG TGGAGCGCAC GCCGGAGGTC GTGGAGTTCC TGGAGGGCAG CTTCGGCCCG
TACCCGTTCA CCGGCGTGGG CGGGGTCGTC GCGCCGGGCA TCGGGTTCGC GCTGGAGAAC
CAGACCAGGC CGACCTACGA CGGCGGGTTC TTCCGGCGCG GGGCGAACAC GTACGTGGTG
GCGCACGAGA TCGCGCACCA GTGGTTCGGG GACTCGGTGT CGGTGCGCGG GTGGCGGGAC
ATCTGGCTGA ACGAGGGGTT CGCGAGCTAC GCGGAGTTCC TGTGGTCGGA GCACACCGGG
GAGGGGACGG CGGCGGAGAA CGCGGACTAC CTGTACGGGC TGTACCCGGC GGACGACCCG
TTCTGGACCG TGCTCCCCGG TGAGCCGGGC GCGGGCGCGA TCTTCGACGG GGCGGTGTAC
GACCGGGGCG CGATGGCGGT GCACGCGGTG CGGACGGCGG TGGGGGACGA GGCGTTCTTC
GCGGTGCTGA AGCGCTGGAC GGCGCAGGAG CGGTTCGGGG ACGCGACGAT CGAGGACTTC
CAGGCGCTGG CGGAGTCGGT GTCGGGGGTG GACCTGGACG AGGTGCTGCG GGTGTGGCTG
TTCACGCCCG CCAAGCCCGC GACGGGGCCG GGGCACTGGG GGTACGCGGC CGACTCGGCG
AACGTGGCCG GGACGGCTGG ACCGGTGGAA GCGGCCGGTT CGGTGGAAGC GGCCGGTTCG
GCGGGGGGCG GCCGGTTCGG CGGGGGCGGC GCGGGTGGTC GCCGAGCCGA AGTCGCGCCA
GAAGATCGTG GAGACGCACG CGCTGCTCTC GCGCGGGGAG TGACGGCGCG GGGGTGA
|
|---|
| Protein sequence | MSLTVPLRGK LATGVALASS LLLLSGVAGA AAPGAPGIGD PYFPKAGNGG YDVSHYDIRL
KYEPGTDRLS GTTTVLARTT EELSAFNLDF LLDVTSVRVN NRVAAHSGTP DGELTVTPGV
VLPAGTELTI VVAYSDVPSR HAVDGFTGWK RTPDGALAID QPDIAPWWFP SDNHPRDKAT
FDVSVAVPDG VEVLSNGLYQ GTVKQIDGWT RWRWRELEPQ ATYLAFVAIG QFEVRHSLAP
SGQASVTAYS ERLGADGPAA RASVERTPEV VEFLEGSFGP YPFTGVGGVV APGIGFALEN
QTRPTYDGGF FRRGANTYVV AHEIAHQWFG DSVSVRGWRD IWLNEGFASY AEFLWSEHTG
EGTAAENADY LYGLYPADDP FWTVLPGEPG AGAIFDGAVY DRGAMAVHAV RTAVGDEAFF
AVLKRWTAQE RFGDATIEDF QALAESVSGV DLDEVLRVWL FTPAKPATGP GHWGYAADSA
NVAGTAGPVE AAGSVEAAGS AGGGRFGGGG AGGRRAEVAP EDRGDARAAL ARGVTARG
|
|---|
| |