| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6671 |
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| Symbol | |
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| ID | 8330887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7807277 |
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| End bp | 7809211 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644947100 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_003104314 |
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| Protein GI | 256380654 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.421809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGAAC CTGTTGACGC CGGCGGGATC GGTGCTCTCG CCTGGTTGCT CCTAGCACTC
CCCGCGTTCG GCGCCGCCGT GCTCCTGCTC GGCGGCAAGC GCACCGACAG GTGGGGCCAC
CTGCTGGGCA CCACCACCGT CGTCGCGTCG TTCGCCTACG GCCTCGCCCT GTTCTTCAGC
ACCCTCGGGC TCAGCCCCGA GGAGCGCTCC AGCGAGCTGC ACCTGTTCGA CTGGGTGCCG
GTCGAGGCCC TGAACGTCGA GTTCGCGCTT CGGCTCGACC CGCTGTCGCT GACCTTCGTG
CTGCTGATCA CCGGCGTCGG CTCCCTGATC CACGTCTACT CGATCGGCTA CATGGCCCAC
GAGGCGGGAC GGCGGAAGTT CTTCGCCTAC CTGAACCTCT TCGTCGCCGC CATGCTCCTG
CTGGTGCTGG GCAACGGCTT CGTGACCCTG TACTTCGGCT GGGAGGGCGT CGGTCTCGCC
TCGTACCTGC TCATCGGCTG GTACCAGCAC AAGCCCGAGG CGGGCAGCGC GGCGAAGAAG
GCGTTCCTGA TGAACCGGGT CGGCGACCTG GGTCTGGCGA TCGCCATCTT CATCATGTTC
AAGGAGCTGG GCACCACCCA GTACACCGAG GTGTTCTCCC GCGTCGACGA GCTGTCGTCC
GGGACGGTCC TGGCCATCAC GCTCCTGCTG CTGCTCGGCG CGTGCGGCAA GTCCGGCCAG
TTCCCGCTCC AGGCGTGGCT CCCGGACGCC ATGGCGGGCC CCACCCCGGT GTCGGCGCTC
ATCCACGCCG CGACCATGGT CACGGCGGGC GTCTACCTCG TCGCCCGCTC CAACCCGCTC
TACAACCTCA CCGAGGACGG CCGCCTGGTC GTCATGGCCA TCGGCGCGTT CACGCTGCTG
ATCGGCTGCC TCATCGGCTG CGCGTACGAC GACTTCAAGA AGGTCCTGGC CTACTCGACG
GTCAGCCAGA TCGGCTACAT GGTCCTGGCC GTGGGCCTCG GCCCGTTCGG CTACGCGCTG
GGCATCATGC ACCTGATCAC GCACGGCTTC TTCAAGGCGG GCCTGTTCCT CGGGGCCGGT
TCGGTCATGC ACGGCATGAA CGACGAGGGC GACATCCGCC GCATGGGCGG TCTGGCCAAG
AAGATGCCGA TCACCTTCGC CACCTGGGCG CTGGGCTACC TGGCGCTCAT CGGCTTCCCG
TTCCTGTCCG GCTACTTCTC GAAGGACGCC ATCATCGCGG CGGCCTTCAG CGAGCACGGC
TGGCGCGGCT GGGTGTTCGG CGGCGTCGCG GCGCTGGGCG CGTTCCTGAC CGCGTTCTAC
ATGACCCGCC TGCTGGTCCT GGTGTTCCTG GGCAAGCCCC GCTGGGAGGA CCTCAAGTCG
GCGGACGGCC GCGAGTACCA CCCGCACGAG TCGCCGGTCA GCATGACCGC GCCGATGGTC
GTGCTGGCGA TCGGCTCGGT CGGCGCGGGC TTCTTCCTCA GCAGCGGCGA CAACCTCGCG
AACTGGCTGG CCCCCGTGGT CGGCGAGCTG CAGGAGCAGC ACGGCGTGCT CGGCCACGGC
GCGGTCAACG CCCTCGTCCT CGCCCTCTCG GCGGCGGGCG CGGTCCTGGC CTACGTGCTG
TTCGGCCGCA AGCCGCAGCC GGTGGAGCGC CCCGAGCGGG TGTCCTTCCC GGTCCGCGCC
GCGCGCGCCG ACCTGTACGG GAACGCGCTC AACGAGGCGC TGTTCGCGCG TCCGGGCACC
TGGCTGACCC GCGCGCTGGT GTTCGTGGAC AACAAGGGCG TCGACGGGCT GGTCAACGGC
TCCGCGGCGC TGCTGGGCGG TAGCTCGGGC AGGCTGCGCA GGCTGCAGAC CGGCTTCGTG
CGCTCCTACG CGCTCTCGAT GCTCCTGGGT TCGATCTTCG TCCTGGGCGC ACTGCTGATG
GTGAGGTTCT CGTGA
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| Protein sequence | MTEPVDAGGI GALAWLLLAL PAFGAAVLLL GGKRTDRWGH LLGTTTVVAS FAYGLALFFS
TLGLSPEERS SELHLFDWVP VEALNVEFAL RLDPLSLTFV LLITGVGSLI HVYSIGYMAH
EAGRRKFFAY LNLFVAAMLL LVLGNGFVTL YFGWEGVGLA SYLLIGWYQH KPEAGSAAKK
AFLMNRVGDL GLAIAIFIMF KELGTTQYTE VFSRVDELSS GTVLAITLLL LLGACGKSGQ
FPLQAWLPDA MAGPTPVSAL IHAATMVTAG VYLVARSNPL YNLTEDGRLV VMAIGAFTLL
IGCLIGCAYD DFKKVLAYST VSQIGYMVLA VGLGPFGYAL GIMHLITHGF FKAGLFLGAG
SVMHGMNDEG DIRRMGGLAK KMPITFATWA LGYLALIGFP FLSGYFSKDA IIAAAFSEHG
WRGWVFGGVA ALGAFLTAFY MTRLLVLVFL GKPRWEDLKS ADGREYHPHE SPVSMTAPMV
VLAIGSVGAG FFLSSGDNLA NWLAPVVGEL QEQHGVLGHG AVNALVLALS AAGAVLAYVL
FGRKPQPVER PERVSFPVRA ARADLYGNAL NEALFARPGT WLTRALVFVD NKGVDGLVNG
SAALLGGSSG RLRRLQTGFV RSYALSMLLG SIFVLGALLM VRFS
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