| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6665 |
|---|
| Symbol | |
|---|
| ID | 8330881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 7798098 |
|---|
| End bp | 7799141 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644947094 |
|---|
| Product | thiamine pyrophosphate protein domain protein TPP-binding |
|---|
| Protein accession | YP_003104308 |
|---|
| Protein GI | 256380648 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.166242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGA TCGACCTCGG CCTTCCCGGA CTGGGCGGGG TGCCCACCGA GGACGGGCCG
CAGAAGGCCA AGGACTACAA GTCGGACCAG GAGGTCCGCT GGTGCCCCGG CTGCGGGGAC
TACGTGGTGC TCAACGCCGT GCAGTCGTTC CTGCCGACGC TGGGGCTCAA GCGCGAGAAC
ATCGTGTTCG TGTCGGGCAT CGGCTGCTCG TCGCGGTTCC CGTACTACAT GAACACCTAC
GGGATGCACT CCATCCACGG CCGGGCGCCC GCGATCGCCA CGGGACTGGC GGTGGCGCGG
CCCGACCTGT CGGTGTGGGT GGTGACCGGG GACGGCGACG CGCTGTCCAT CGGCGGCAAC
CACCTGATCC ACACGCTGCG GCGCAACGTG AACCTGAAGA TCCTGCTGTT CAACAACCGG
ATCTACGGGC TCACCAAGGG CCAGTACTCG CCGACCTCCG AGGCGGGCAA GGTCACCAAG
TCCACGCCGT CCGGGTCGCT GGACCACCCG TTCAACCCGG TGTCGCTGGC GCTGGGCGCG
GAGGCCTCGT TCGTGGGCCG GGCGATGGAC TCGGACCGGG TGGGGCTGAC CGACGTGCTG
CGGCAGGCCG CCGAGCACCG GGGGTCGGCG CTGGTGGAGA TCTACCAGAA CTGCCCGATC
TTCAACGACG GCGCGTTCGA CGTGCTCAAG GACGCCGACT CGGCGGCCCA GCGGATCATC
CCGGTGGAGC ACGGGAAGCC GATCGTGTTC GGCGGCGGCG AGCACGCGGT GGTGCGGCGC
GGGTTCGGGC TGGCGGTGGC GCGGACGTCC GAGGTGGACG CGGCGGACGT GGTGGTGCAC
GACGCGGGCG ACCTGGAGCT GGGGTTCGCG CTGTCGCGGC TGTCGACGCA GGACCTGACG
CACGTGGTGA CCGGCGTGTT CCGGCGGTCG GCGCGGGAGA CCTACGACGA CGCGGCGCGG
GCGCAGGTGG AGCGGGCCAA GGCGGCTCGA CCGGCGAACC TGGCGTCGCT GCTGCGCGGG
AAGGACACCT GGACGGTGGC GTGA
|
|---|
| Protein sequence | MTAIDLGLPG LGGVPTEDGP QKAKDYKSDQ EVRWCPGCGD YVVLNAVQSF LPTLGLKREN
IVFVSGIGCS SRFPYYMNTY GMHSIHGRAP AIATGLAVAR PDLSVWVVTG DGDALSIGGN
HLIHTLRRNV NLKILLFNNR IYGLTKGQYS PTSEAGKVTK STPSGSLDHP FNPVSLALGA
EASFVGRAMD SDRVGLTDVL RQAAEHRGSA LVEIYQNCPI FNDGAFDVLK DADSAAQRII
PVEHGKPIVF GGGEHAVVRR GFGLAVARTS EVDAADVVVH DAGDLELGFA LSRLSTQDLT
HVVTGVFRRS ARETYDDAAR AQVERAKAAR PANLASLLRG KDTWTVA
|
|---|
| |