| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6657 |
|---|
| Symbol | |
|---|
| ID | 8330873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7790487 |
|---|
| End bp | 7791077 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 644947086 |
|---|
| Product | NADH dehydrogenase (ubiquinone) 30 kDa subunit |
|---|
| Protein accession | YP_003104300 |
|---|
| Protein GI | 256380640 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.885595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCG CCACCGCCGC GCTCGCCGAG CGGGTGCCCG GCGCCCAGGT CAAGACCGCC
TTCGGGCAGA CCACCGCGCA CGTCGCGCTC GCCGACTGGA CCATCGCCGC CGCGCACGCC
CGCGACGAAC TGGGCTGCGC CTTCTTCGAC TGGCTCGGCG TCGAGGACGC GGGCCGCCCC
GGCGCCTCCG GCGGCGCGCA CGCGGTGCTG CTGCACGTCG CGAACCCGGA CACCCGCGAG
GGCCTGGCGC TGCGCACCGA GGTCGGCGCG GACGAGGCGC TGCCCAGCGT CGCCGGGCTG
TGGGCGGGCG CCGCCTGGCA CGAGCGGGAG GCCGCCGAGA TGTTCGGCAT CCCGATCCTC
GGCAGGCCCG ACCCCGAGCG GCTGCTGCTG CCCGACTCGT TCGCCGGGCA CCCGCTGCGC
AAGGACTTCG TGCTCGTCTC CCGCGTGGTG CGCCCCTGGC CGGGCCGCCT CGAACCCGGC
GAGGACGGCT CCTCGTCCCC CAGCCGCAGG CGCGCCGCGC CGCCCGGCGT GCCCGACCCG
TCGTGGGGCC CGCGCCCCGA GCCGACCGAG GGCGAGGCCG ACCGTGGCTG A
|
|---|
| Protein sequence | MPPATAALAE RVPGAQVKTA FGQTTAHVAL ADWTIAAAHA RDELGCAFFD WLGVEDAGRP
GASGGAHAVL LHVANPDTRE GLALRTEVGA DEALPSVAGL WAGAAWHERE AAEMFGIPIL
GRPDPERLLL PDSFAGHPLR KDFVLVSRVV RPWPGRLEPG EDGSSSPSRR RAAPPGVPDP
SWGPRPEPTE GEADRG
|
|---|
| |