| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6649 |
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| Symbol | |
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| ID | 8330864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7781913 |
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| End bp | 7784528 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644947077 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_003104292 |
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| Protein GI | 256380632 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.829365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACC AGACCTCGGC CCCGACGTCG AACACGTCGC CCAGGTCGAC CAACCGAGCG
TTCACCGCCT TCGCGGTGCT GCTGCTCGTC GCGGGCGTCC TGTCCGCGTT CCTCGTGGGG
GCGAACCTCC CCGACGACCC GTCCCGCCTC AGCCTCCTGT GGACCGGCCC GCTGCTCGTC
GTCGGCTTCC TGCTGGCCGA GCAGCTCGCG ATCAACGTCG ACGTCCGCAG CGGCGTCGCC
TGGACGATCT CCTTCACCGA GATCCCGCTC GTCCTCGGCC TGCTCGTCGC ACCCTTCGAG
GTCGTCCTCG CCGCCCACGT CGTCGCGGGC GTCGGCACCC TCCTCGGCAG GCGCGTGCTC
GACCGCGCGG TCTACAACGC CGGCCTGATG TTCATGGAGA TCTCGGTCGC CTTCGCCGTG
GCCGACGCCG TCAACCGGTT CGTCGGCGAC ACCGGCCCCG CCTGGGCGGG CGCGTTCGTC
GGCACCATCA GCGTCCCGCT GCTCGCCAGC GTCCTCGGCC TCACCGCCCT GCGCCTCATG
CGCAAGGGGA TGCGCCTGGC CCCCAGCGGC CGACTCGTCC TGCAGACCCT CGTCGTCGCG
CTCCTCAACA CCGCCGCGGG CCTGGTCGCC TACGAGGTCG CCGACCACGC CCAGTGGGGC
GGCCTGCTGA TCGTGCTGGC CTTCGCCGGC ATCACCGCCA TCTACCTCGC CTACTCCGGC
CTGCTGCGCG AGCAGCGCGA CCTGGAGGCG CTCAGCGAGG TCTCGCTCCG CGTCGCCCGC
TCCGGCAGGC ACGGCACCGG CCCGCGCGGC GGGGCCACCA CCGCCGTCGA CGCCGAGGAC
GGCAAGGCCG AGGCCGACGA GTGGCAGCAC ATCGCCGAGC GCATCCGCGA GCAGCTCAAC
GCCAACCGGG TCGTCCTGCG CCTGCGCACC GACCCGCAGG CCCCCATGCG CACCCTCGTC
GCGGGCGAGC CGCTGCCGCA GGCCATGCGC CGCGACGACG CCCGCACGTC CCGCGAGGAC
GCGATGCTCC AGCTCCCCGG CACCCAGGTC CGCTACTTCC GGGTCGCCGA CGCGGGCGAG
GAGGCCACCG ACGCCCTCGT CCGCCGCGAC GCCCAGGAGG CGCTCGTCGT CCCGCTGCGC
GGCGGGGCCA CCCAGCTGCT CGGCGCCGTC GAGGTGCACG ACCGGCTCAG CCGGTGGCGC
GGCTTCGGCA AGGCCGACAT CCAGCTCCTG CGCACCCTGG CCAACCACCT GTCCACCGCC
GTGGACAACC GCAGGCTCCT CGCCAGGCTC CGCCACGACG CCTACCACGA CCCGCTGACC
GGCCTGCTCA ACCGCACCGG CTTCCTGGAG GCCGCGGCCG AGCCCGTCCG CGAGTCCGGG
GCCGCCGTCG TGCTCCGGGT CGACCTGGAC GTGCTGTCCA CCGTCCTGGA CGCCCTCGGC
CAGGCGTGGG GCGACCGCAT GGTCGTCGCC GCGGGCCGCA GGCTCCGCGA CGAGCTGGGC
CCCGACGTCC CGCTGGCCAG GCTCGACGGC GGCGCGTTCG CGGCGCTCCT GGTCGACCGC
AAGGCCGAGC GGGTCAAGGA GATCGCCGAG CGCCTGCGCG CCCGCCTGTC CGTGCCGTAC
CCCGTCGACC GGCTCACCGT CGAGGCGGGC GCCATCGTCG GCTGGGCGGA CGTCGCCGAG
GTCGAGGACG ACGCCAAGGA CGCGGACTCG CTGCTCCAGC GCGCCGACGT GGCGCTGCGG
GCCACCAGTG AGAACGAGCC CATGCGCGCC TACGCGCCCA GCATGGGCCA GATCTTCCTG
CGCCGCTTCC AGCTGGTCAC CCAGTTCCGC TCCGCGCTGG AGAACGGCCA GATCTCGGTG
CACTACCAGC CGAAGATCGC CCTGCCGAGC AGGCAGGTCA TCGGCGCCGA GTCGCTCGTG
CGGTGGAAGC ACCCCGAGTT CGGCCGCGTC GACCCCGACG AGTTCATCCC CGCGGTGGAG
GCGACCGGGC TCGTCGACGT GCTCACCGAC TTCGTCATGG ACAAGGGCCT GGAGCGGGTC
CGCCGCTGGA TGGACCGCGA CCTGCGGATG TCCATCGCGG TGAACCTGTC CGTGCGCACC
CTCGCCGACG AGGAGTTCCC CGACCGGGTG AAGGAAGCGC TCGACCGGCA CCGGGTCCCG
CCGGAGCTGC TCACGTTCGA GCTGACCGAG TCCGGCGTCA TGGCCGACCC CGAGCGCGCC
CTGCCCGTCC TGCGCAGGCT GCACACCATG GGCGTCGTGC TGGCGGTGGA CGACTTCGGC
ACCGGCTACT CGTCGCTGGC CTACCTGCGG CAGCTCCCGG TGGACGAGGT GAAGATCGAC
AAGAGCTTCG TGCTCGGCAT GGGCACCGAC CTCGGCGACA TGGCCGTCGT CCGCTCGATC
GTCGAGCTGG GCCACTCGCT CGGCCTCACC GTCGTCGCCG AGGGCGTCGA GGACGACGCC
GCGCGCGACC AGCTGGTCGG GATGGGCTGC GACGTCGCCC AGGGCTACCT GATCTCCCGA
CCGCTCTCCG AGGAGCGCTT CGAAGCGTGG TTGCGAGCGC GAACCGTGCA GGTCAGGGGA
GCGCGGGATG AGACGGTGCT CACTCTGGTG CACTGA
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| Protein sequence | MSDQTSAPTS NTSPRSTNRA FTAFAVLLLV AGVLSAFLVG ANLPDDPSRL SLLWTGPLLV
VGFLLAEQLA INVDVRSGVA WTISFTEIPL VLGLLVAPFE VVLAAHVVAG VGTLLGRRVL
DRAVYNAGLM FMEISVAFAV ADAVNRFVGD TGPAWAGAFV GTISVPLLAS VLGLTALRLM
RKGMRLAPSG RLVLQTLVVA LLNTAAGLVA YEVADHAQWG GLLIVLAFAG ITAIYLAYSG
LLREQRDLEA LSEVSLRVAR SGRHGTGPRG GATTAVDAED GKAEADEWQH IAERIREQLN
ANRVVLRLRT DPQAPMRTLV AGEPLPQAMR RDDARTSRED AMLQLPGTQV RYFRVADAGE
EATDALVRRD AQEALVVPLR GGATQLLGAV EVHDRLSRWR GFGKADIQLL RTLANHLSTA
VDNRRLLARL RHDAYHDPLT GLLNRTGFLE AAAEPVRESG AAVVLRVDLD VLSTVLDALG
QAWGDRMVVA AGRRLRDELG PDVPLARLDG GAFAALLVDR KAERVKEIAE RLRARLSVPY
PVDRLTVEAG AIVGWADVAE VEDDAKDADS LLQRADVALR ATSENEPMRA YAPSMGQIFL
RRFQLVTQFR SALENGQISV HYQPKIALPS RQVIGAESLV RWKHPEFGRV DPDEFIPAVE
ATGLVDVLTD FVMDKGLERV RRWMDRDLRM SIAVNLSVRT LADEEFPDRV KEALDRHRVP
PELLTFELTE SGVMADPERA LPVLRRLHTM GVVLAVDDFG TGYSSLAYLR QLPVDEVKID
KSFVLGMGTD LGDMAVVRSI VELGHSLGLT VVAEGVEDDA ARDQLVGMGC DVAQGYLISR
PLSEERFEAW LRARTVQVRG ARDETVLTLV H
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