| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6632 |
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| Symbol | |
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| ID | 8330844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7768478 |
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| End bp | 7769464 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644947057 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003104275 |
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| Protein GI | 256380615 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.146585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCG ACCGCCTCCT CGGGGTGGCC GTGCTCGTCG TGGTCGCGCC GTACCGGGGC
GCGACCACCA CCACGACCAC CGTGCTGCTG CGCGCCGACC GGGTCGGGAA CCAGCTCGCG
GTGGACTCGG ACGTGAAGGT CCCGGGGCTG GTGGTGGGTT GGGTCAGCGC GGAGCTGCCC
GAGCTGCGGC GGGGCATCAC CGCGCTGGCC GACACGACCA TCGAGAGCGC CGACCTCGGA
CCGAGCACCG GCTGCACCGC CCGGTTCACC GACGCGACCG GCCTCGCCGA GGGCGACGAC
GTGCGCGTCG CGGGCGTGAG GGTCGGCAGG GTGGACGGGG TGCGGGTGGT GGATCAGCGC
GGTCGGGGGC GCAGCTCCGC CGAGGTCGCG TTCTCGCTCA CCGGGGAGCG CTCGCTGCCC
GCGTCCACCA CCGCCGCGAT CGAGTACCGC GACCTCGTCG GCAGGCGCTA CCTCGCGCTG
GAGCAGGGCG CGGGCCCGGT CGGGGAGGCG CTGCCGCCCG GCGGCGGCAT CCCGCTGGAG
CGCACCCGGC CCGCGCTCGC CCTGACCGCG CTGTTCACCG GCTTCAAGCC GCTGTTCCAG
GAGCTCTCCC CGGAGGAGGT GAACCGGCTG TCCACCCGGA TCGCGCAGGT GCTCCAGGGC
GAGGGCGGCA CGGTGGACGC GCTGCTGCGG CACACCGCCT CCCTCACCTC CACCCTCGCC
TCCCGCGACC GGGTCGTCGG CGAGGCCATC TCCGCGCTCG GCGACCTGGC GTCCACCACC
GCGGGCTTCC TGGACGAGGC CCGGCCGCCG CTCAGGACCG ACATCGCGAA CCTCGGCCTG
GTCGCCGCCA CCCTCGGCAA CGGGCGCTGG TTCGACACCT ACCTGTGCGG GCTGCTGCCG
CCGTCGGTGG ACCTCGGGCT GGTCGGGTTC ACCGAGGAGG GCTGCCTGCC GCCGGGAGTC
CAGCGCACGC CGATGGGAGG GGGCTGA
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| Protein sequence | MSRDRLLGVA VLVVVAPYRG ATTTTTTVLL RADRVGNQLA VDSDVKVPGL VVGWVSAELP
ELRRGITALA DTTIESADLG PSTGCTARFT DATGLAEGDD VRVAGVRVGR VDGVRVVDQR
GRGRSSAEVA FSLTGERSLP ASTTAAIEYR DLVGRRYLAL EQGAGPVGEA LPPGGGIPLE
RTRPALALTA LFTGFKPLFQ ELSPEEVNRL STRIAQVLQG EGGTVDALLR HTASLTSTLA
SRDRVVGEAI SALGDLASTT AGFLDEARPP LRTDIANLGL VAATLGNGRW FDTYLCGLLP
PSVDLGLVGF TEEGCLPPGV QRTPMGGG
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