| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6626 |
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| Symbol | |
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| ID | 8330838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7756765 |
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| End bp | 7760661 |
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| Gene Length | 3897 bp |
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| Protein Length | 1298 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644947051 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_003104269 |
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| Protein GI | 256380609 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG TCAACTTCTT CGATGAGCTC CGCATCGGTC TCGCCACCGC GGACGACATC
CGCCAGTGGT CCTTCGGCGA GGTCAAGAAG CCCGAGACCA TCAACTACCG CACGCTCAAG
CCGGAGAAGG ACGGCTTGTT CTGCGAGAAG ATCTTCGGTC CCACCAGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG CGTGCGCTTC AAGGGCATCA TCTGCGAGCG CTGCGGCGTC
GAGGTGACCC GCGCCAAGGT GCGCCGCGAG CGCATGGGCC ACATCGAACT GGCCGCGCCG
GTCACCCACA TCTGGTACTT CAAGGGCGTC CCCAGCCGGT TGGGCTACCT GCTCGACCTG
GCCCCCAAGG ACCTCGAGAA GATCATCTAC TTCGCGGCCT ACGTCATCGT GGGCGTCAAC
GCGGAGCTGC GCCACACCGA CCAGCCCACG CTCGACAGCG AGATGCAGGT CGAGCGCAAG
CGCGTCGAGA ACCGCCGCGA CGCGGACGTC GAGGCCCGCG CGCAGAAGCT GGAAGCCGAC
CTGGCCGAGC TGGAGGCCGA GGGCGCCAAG TCCGACGTCC GCCGCAAGGT CAAGGAGGGC
GGCGAGCGCG AGATGCGCCA GCTCCGCGAC CGCGCCCAGC GCGAGCTGGA CCGGCTCGAC
GAGATCTGGA GCACGTTCGT CAAGCTGGAG CGCGCCCAGC TCATCGCCGA CGAGCAGCTC
TACCGCGAGC TGTACGACCG GTACGGCGAC TACTTCACCG GCGCCATGGG CGCCGAGGCC
ATCCAGAAGC TGCTCGGCGA CTACGACGTG GACGCCGAGG CCGAGGTGCT GCGCGAGACC
ATCCGCAGCG GCAAGGGCCA GAAGAAGCTC CGCGCCCTCA AGCGCCTCAA GGTCGTCGCC
GCGTTCCAGG CGACCCGCAA CAACCCGCAG GGCATGGTCC TGGACTGCGT CCCGGTCATC
CCGCCGGACC TGCGCCCCAT GGTGCAGCTC GACGGTGGCC GCTTCGCGAC CTCCGACCTG
AACGACCTGT ACCGCCGCGT CATCAACCGC AACAACCGCC TCAAGCGACT GATCGACCTC
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TGCAGGAGGC CGTCGACGCG
CTGTTCGACA ACGGCCGTCG CGGCCGTCCG GTGACCGGTC CGGGCAACCG CCCGCTCAAG
TCGCTGTCCG ACCTGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTCGGCAAG
CGCGTCGACT ACTCCGGCCG CTCGGTCATC GTCGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CCAAGCAGAT GGCGCTGGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTGGACCTGA ACCACGCGCA GAACATCAAG TCGGCCAAGC GCATGGTCGA GCGCGCCCGC
CCCGCCGTGT GGGACGTCCT CGAAGAGGTC ATCACCGAGC ACCCGGTGCT GCTCAACCGC
GCGCCCACGC TGCACCGCCT CGGCATCCAG GCCTTCGAGC CGCAGCTGGT CGAGGGCAAG
GCCATCCAGC TCCACCCGCT CGTCTGCGAG GCGTTCAACG CCGACTTCGA CGGCGACCAG
ATGGCCGTCC ACCTGCCGCT GTCCGCCGAG GCCCAGGCCG AGGCGCGCGT GCTGATGCTG
TCGTCGAACA ACATCCTCTC GCCCGCGTCC GGCAAGCCGC TGGCCATGCC GCGACTGGAC
ATGGTGACGG GTCTGTACCA CCTGACCTGG CACAAGGAGG ACGACCTCGG CGAGGGCCAG
GCGTACTCCT CGCCCGCCGA GGCGCAGATG GCGTTCGACC GCAAGGCGCT GGGCCTGCAG
GCGATGTGCA AGATCCGCAT CACCGACAAG AACCCGCCGC GCGGCCAGGA GCCCGAGGGC
TGGGAGCCCG GTCAGCCGTG GCTGGCCGAG ACCACCCTCG GCCGGGTGCT GTTCAACGAG
GTCCTGCCGC AGGACTACCC GTTCCTGAAC GAGGTCATGC CCAAGAAGCG GCAGGCCACG
GTCATCAACG ACCTCGCCGA GCGGTACCCG ATGGTCACCG TCGCCCGGAC GCTGGACAAG
CTGAAGGACG CCGGCTTCCA CTGGGCCACC CGCTCCGGCG TGACCGTCGC GATCTCCGAC
GTGCTCGTCC CCGAGGCCAA GCAGGGCATC CTCGACGAGT ACGAGAAGCT CGCGGACGCG
GTGGAGAAGC GCTACCAGCG CGGTCAGCTG TCCTACACCG AGCGCAACAA CGAGCTCGTC
AAGGTGTGGA CCAAGGCGAC CGAGGACGTC GCCCAGGTCA TGGAGGACAA CTTCCCCGAG
GACAACTCGA TCCGCAAGAT CGTGAAGTCC GGCGCGGCGG GCAACATGAC CCAGGTCCGC
TCCCTCGCGG GTATGCGCGG CCTGGTCACG AACCCGAAGG GCGAGTACAT CCCGCGCCCG
ATCAAGAACT CATTCCGCGA GGGCTTGTCG GTCCTGGAGT ACTTCATCGC CACGCACGGC
GCCCGCAAGG GTCTGGCCGA CACCGCGCTC CGCACGGCGG ACTCGGGCTA CCTGACCCGT
CGTCTGGTGG ACGTCTCGCA GGACGTCATC ATCCGCGAGA TCGACTGCGG CACCACGCGC
GGCGTGGGCA TGACCGTGGG CGAGGTCCTG AGCGACCGCG TCGGCCTGCA CGAGTTCGCG
CAGACCAGCG TGTACGCCCG GACCCTGGCC GAGGACATCA CCGACAAGGA CGGCAACCTC
GTCCTCAACC GCGGTGACGA CCTGGGCGAC CCGGCGCTCC AGACCCTGGT GACCAACAAC
GTCGTCCGGG TGAAGGTCCG CTCCGTGCTG ACCTGCGAGT CCGCGGTCGG CGTGTGCGCG
TCCTGCTACG GCCGCTCGAT GGCCACCGGC CAGCTGGTCG ACGTCGGCGA GGCCGTCGGC
ATCGTCGCCG CCCAGTCGAT CGGTGAGCCC GGCACCCAGC TGACGATGCG CACCTTCCAC
CAGGGTGGTG TGGCCGGTGA CGACATCACC ACCGGTCTGC CGCGTGTCCA GGAGCTGTTC
GAGGCCCGCG TCCCGAAGGG CAAGGCGCCC ATCGCCGACG TCGACGGCCG CGTGCGGATC
GAGGACGGCG ACCGCTTCTG GAAGATCACC CTCATCCCGG ACGACGGGTC CGAGGAGATC
CTCTTCGAGA AGCTCTCGAA GCGTCAGCGC CTGGCCAACA CGGCCACCGG CCCGCTGCAG
GACGGCGACC ACGTGAGCGT CGGCCAGCAG CTGCTGGAGG GCACGCCCGA CCCGCACGAG
GTCCTGCGGG TCATGGGTCC GCGCGAGGCC CAGCTGCACC TGGTGCAGGA GGTCCAGAAG
GTCTACCGCG CCCAGGGCGT GGCGATCCAC GACAAGCACA TCGAGGTCAT CGTCCGGCAG
ATGCTGCGCC GGGTCACGAT CATCGACTCG GGTGCGACGG AGTTCCTGCC GGGCTCGCTG
GTCGAGCGCG CGGACTTCGA GTCGGGCAAC CGCCAGGTCG TGGCCGAGGG CGGCGAGCCC
GCCGCCGGTC GCCCGGTCCT GATGGGCATC ACGAAGGCGT CGCTGGCCAC GGACTCGTGG
CTGTCGGCGG CCTCCTTCCA GGAGACGACG CGCGTCCTGA CCGACGCCGC CATCAACGGG
CGGTCGGACA AGCTGATCGG CCTGAAGGAG AACGTGATCA TCGGTAAGCT GATCCCGGCC
GGCACCGGCA TCAACCGGTA CCGGAACATC CAGGTCCAGC CGACCGAGGA GGCGCGCGCC
GCCGCGTACG CCATCCCGAG CTACGACGAC GGCTACTACA CGCCGGACGT GTTCGGGACC
GGCACGGGCG CCGCGGTTCC GCTGGACGAC TACGACTTCG GTCGCGACTA CCGCTGA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RQWSFGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKIIY FAAYVIVGVN AELRHTDQPT LDSEMQVERK RVENRRDADV EARAQKLEAD
LAELEAEGAK SDVRRKVKEG GEREMRQLRD RAQRELDRLD EIWSTFVKLE RAQLIADEQL
YRELYDRYGD YFTGAMGAEA IQKLLGDYDV DAEAEVLRET IRSGKGQKKL RALKRLKVVA
AFQATRNNPQ GMVLDCVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL
GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
PAVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ
MAVHLPLSAE AQAEARVLML SSNNILSPAS GKPLAMPRLD MVTGLYHLTW HKEDDLGEGQ
AYSSPAEAQM AFDRKALGLQ AMCKIRITDK NPPRGQEPEG WEPGQPWLAE TTLGRVLFNE
VLPQDYPFLN EVMPKKRQAT VINDLAERYP MVTVARTLDK LKDAGFHWAT RSGVTVAISD
VLVPEAKQGI LDEYEKLADA VEKRYQRGQL SYTERNNELV KVWTKATEDV AQVMEDNFPE
DNSIRKIVKS GAAGNMTQVR SLAGMRGLVT NPKGEYIPRP IKNSFREGLS VLEYFIATHG
ARKGLADTAL RTADSGYLTR RLVDVSQDVI IREIDCGTTR GVGMTVGEVL SDRVGLHEFA
QTSVYARTLA EDITDKDGNL VLNRGDDLGD PALQTLVTNN VVRVKVRSVL TCESAVGVCA
SCYGRSMATG QLVDVGEAVG IVAAQSIGEP GTQLTMRTFH QGGVAGDDIT TGLPRVQELF
EARVPKGKAP IADVDGRVRI EDGDRFWKIT LIPDDGSEEI LFEKLSKRQR LANTATGPLQ
DGDHVSVGQQ LLEGTPDPHE VLRVMGPREA QLHLVQEVQK VYRAQGVAIH DKHIEVIVRQ
MLRRVTIIDS GATEFLPGSL VERADFESGN RQVVAEGGEP AAGRPVLMGI TKASLATDSW
LSAASFQETT RVLTDAAING RSDKLIGLKE NVIIGKLIPA GTGINRYRNI QVQPTEEARA
AAYAIPSYDD GYYTPDVFGT GTGAAVPLDD YDFGRDYR
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