Gene Amir_6607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6607 
Symbol 
ID8330819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7742802 
End bp7743221 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID644947033 
Productribosomal protein L16 
Protein accessionYP_003104251 
Protein GI256380591 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCATCC CGCGCAGGGT TAAGCACCGC AAGCAGCACC ACCCCGGTCG TTCCGGTGCT 
GCCAAGGGCG GCACGAGGGT CACCTTCGGC GAGTTCGGCA TCCAGGCCCT GGAGCCCGCC
TACGTGACCA ACCGGCAGAT CGAGTCGGCT CGTATCGCCA TCACCCGGCA CATCCGCCGC
GGTGGCAAGG TGTGGATCAA CATCTTCCCC GACCGCCCGC TGACGAAGAA GCCCGCCGAG
ACCCGCATGG GTTCCGGCAA GGGCTCTCCG GAGTGGTGGG TGGCCAACAT CAAGCCGGGG
CGGGTCCTCT TCGAGATGTC CTTCCCGAAC GAGGCAACCG CCCGTGAGGC GCTCCGTCGC
GCGATCCACA AGCTGCCGAT GAAGTGCCGC ATCGTCACGC GTGAGGGTGG TGACTTCTGA
 
Protein sequence
MLIPRRVKHR KQHHPGRSGA AKGGTRVTFG EFGIQALEPA YVTNRQIESA RIAITRHIRR 
GGKVWINIFP DRPLTKKPAE TRMGSGKGSP EWWVANIKPG RVLFEMSFPN EATAREALRR
AIHKLPMKCR IVTREGGDF