Gene Amir_6602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6602 
Symbol 
ID8330814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7740965 
End bp7741528 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID644947028 
Productribosomal protein L5 
Protein accessionYP_003104246 
Protein GI256380586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CTGAGAAGAT CACGCCGCGG CTGAAGACCC GCTACCGCGA GGAAATCGCC 
GCCGAGCTGC AGAAGCAGTT CGAGTACGCG AACGTGATGC AGATCCCCGG CGTCGTGAAG
GTCGTCGTCA ACATGGGTGT CGGCGACGCC GCCCGCGACG GCAAGCTGAT CGAGGGCGCC
GTGCGCGACC TGTCGATCAT CACCGGCCAG CGCCCCGAGG TCCGCAGGGC CCGCAAGTCC
ATCGCGCAGT TCAAGCTGCG CGAGGGCATG CCCATCGGCG CCCGCGTCAC GCTGCGCGGC
GACCGCATGT GGGAGTTCCT GGACCGCCTG CTGACGATCG CGCTGCCGCG CATCCGCGAC
TTCCGCGGCC TGTCCGGCAA GCAGTTCGAC GGCAACGGGA ACTACACGTT CGGCCTCAAC
GAGCAGTCGA TGTTCCACGA GATCGACCCG GACGCCATCG ACCGCCCGCG CGGCATGGAC
ATCACGGTCG TCACGACCGC CACCAACGAC GAGGAGGGTC GGGCGCTGCT CAAGCACCTG
GGCTTCCCGT TCAAGGAGAA CTGA
 
Protein sequence
MTTAEKITPR LKTRYREEIA AELQKQFEYA NVMQIPGVVK VVVNMGVGDA ARDGKLIEGA 
VRDLSIITGQ RPEVRRARKS IAQFKLREGM PIGARVTLRG DRMWEFLDRL LTIALPRIRD
FRGLSGKQFD GNGNYTFGLN EQSMFHEIDP DAIDRPRGMD ITVVTTATND EEGRALLKHL
GFPFKEN