| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6584 |
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| Symbol | rpsD |
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| ID | 8330796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7731079 |
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| End bp | 7731684 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644947010 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_003104228 |
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| Protein GI | 256380568 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.234143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGCT ACACCGGACC GGCCACGCGC ATCTCGCGTC GCCTCAAGGT CGACCTCATC
GGTGGGGACC AGGCGTTCGA GCGCCGCCCC TACCCGCCCG GCCAGCACGG CCGAGGGCGC
ATCAAGGAGT CCGAGTACCT CCTGCAGCTG CAGGAGAAGC AGAAGGCTCG CTACACGTAC
GGCATCCTTG AGAAGCAGTT CGTCCGCTAC TACAAGGAAG CGGTTCGCCG CACCGGCAAG
ACCGGTGAGA ACCTGCTGCA GATCCTCGAG TCGCGCCTGG ACAACGTGGT GTACCGCGCC
GGTCTGGCCC GCACCCGCCG TCAGGCCCGC CAGCTGGTCA GCCACGGTCA CTTCCTGGTC
AACGGCCACA AGGTGAACAT CCCGAGCTAC CAGGTGTCGA AGTTCGACAT CATCGACGTC
AAGCCCAAGT CGCTGCCGCT GCTGCCCTTC GAGGCCGCGC GCGCGTCCTT CGGCGACCGT
CCGGTGCCGG CGTGGCTGCA GGTCGTCCCG TCGAACCTGC GGATCCTGGT GCACCAGCTC
CCGGAGCGGG CGCAGATCGA CACGCCCGTC ACCGAGCAGC TGATCGTCGA GCTCTACTCG
AAGTGA
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| Protein sequence | MARYTGPATR ISRRLKVDLI GGDQAFERRP YPPGQHGRGR IKESEYLLQL QEKQKARYTY
GILEKQFVRY YKEAVRRTGK TGENLLQILE SRLDNVVYRA GLARTRRQAR QLVSHGHFLV
NGHKVNIPSY QVSKFDIIDV KPKSLPLLPF EAARASFGDR PVPAWLQVVP SNLRILVHQL
PERAQIDTPV TEQLIVELYS K
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