| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6554 |
|---|
| Symbol | |
|---|
| ID | 8330766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7694629 |
|---|
| End bp | 7695108 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644946981 |
|---|
| Product | protein of unknown function UPF0079 |
|---|
| Protein accession | YP_003104199 |
|---|
| Protein GI | 256380539 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.395144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGA CGGTGGAGGA CACCGAGGCG TTCGGCAGGG CGCTGGGCGA GTCGGCGCGG
GCGGGCGACC TGCTCCTGCT CGCCGGGCCG CTCGGCGCGG GCAAGACGGC GCTGGTGCGC
GGCCTCGCGG CCGGGCTGGG CGTGCGGGGG CGGGTGAGCT CGCCGACGTT CGTGATCGCG
CGGGTGCACG ACGCCGGTGA GCGCGGCGTG GCGCTGGTGC ACGTCGACGC CTACCGGCTG
GGCGGCGACC TGGCGCAGCT GGACGACCTG GACCTGGACA CCGACCTGGT GGACGCGGTG
GTGGCCGTCG AGTGGGGCGA GGGCGCGGCG CGGCTGTCCG AGGACCACCT GCTGGTGCGG
TTGGAGCGGC GCGACGACGA CGTGCGCGTG GCGCGGCTGG AGCCCAGCGG GGCTTGGGTC
GGGCGGGAGC TGCCCGGTGC GGGACCCCGC AGCGCGGAGG CCGCAGACCG CAACGGGTGA
|
|---|
| Protein sequence | MLPTVEDTEA FGRALGESAR AGDLLLLAGP LGAGKTALVR GLAAGLGVRG RVSSPTFVIA
RVHDAGERGV ALVHVDAYRL GGDLAQLDDL DLDTDLVDAV VAVEWGEGAA RLSEDHLLVR
LERRDDDVRV ARLEPSGAWV GRELPGAGPR SAEAADRNG
|
|---|
| |