| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6543 |
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| Symbol | |
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| ID | 8330755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7685657 |
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| End bp | 7687282 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644946971 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003104189 |
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| Protein GI | 256380529 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGC AGATCAGCTT CGACGAGGAC GCTCGTCGGG CGCTCGAGCG CGGCGTGAAC
AAGCTGGCGG ACACGGTCAA GGTCACCCTT GGCCCGCGTG GTCGCCACGT CGTGCTGGAC
AAGAAGTTCG GCGGCCCCAC GGTCACCAAC GACGGCGTCA CCATCGCTCG CGAGATCGAG
CTGGACGACC CGTTCGAGAA CCTGGGCGCG CAGCTCGCCA AGAGCGTCGC GACCAAGACC
AACGACATCG CCGGTGACGG CACCACGACC GCGACCGTGC TGGCGCAGGC GATGGTCCGC
GTCGGGATGC GGAACGTGGC GGCGGGCGCC AACCCGACCG CGCTCGGCAA GGGCGTCCAG
GCCGCCGCCG ACGCCGTCGT GGACGCGCTC AAGGCCAAGG CCACCCCGGT CAAGGGCCGC
GACAACATCG CCCAGGTCGG CACCGTGTCC TCCCGCGACG AGTCGATCGG CTCGCTGCTC
GGCGAGGCCA TCGAGAAGGT CGGCGAGGAC GGCGTCATCA CCGTCGAGGA GTCCTCGACG
ATGGCGACCG AGCTGCACAT CACCGAGGGC GTGCAGTTCG ACAAGGGCTA CGTGTCGGCG
CACTTCGCCA CCGACCTCGA GGCCCAGGAG ACGGTGTTCG AGGACGCCCG CATCCTGCTG
CACCGCGAGA AGATCTCGGC GCTGGCCGAC CTGCTCCCGC TGCTGGAGAA GGTCGCCGAG
GCGGGCAAGC CGCTCGTCAT CATCGCCGAG GACGTCGAGG GCGAGGCGCT GTCCACCCTG
GTGGTCAACG CCCTGCGCAA GACGCTGCGC GTGGTCGCGG TCAAGGCGCC GTTCTTCGGC
GACCGCCGCA AGGCGTTCCT GGACGACCTC GCGGTCGTCA CCGGCGGCCA GGTCATCGCC
GCCGAGGTGG GCCTGAAGCT GTCCGAGGCC GGTCTCGACG TGCTGGGCGC CGCCCGCCGC
GTCGTGGTCT CCAAGGACAA CACCACGATC GTGGACGGCG CGGGCGCCAA GGCGGACGTG
GCCGGTCGCG CGGAGCAGCT GCGCCGCGAG ATCGAGGCCA GCGACTCCGA CTGGGACCGC
GAGAAGCTGC AGGAGCGGCT GGCCAAGCTG TCCGGCGGCA TCGCCGTGAT CAAGGTCGGC
GCGGCCACCG AGACCGAGCT CAAGGAGCGC AAGCACCGCA TCGAGGACGC GGTCGCCGCC
ACCAAGGCCG CGGTCGAGGA GGGCATCGTC CCCGGCGGCG GTTCGGCGCT GATCCACGCG
TCGAAGGTGC TCGACGGCGG GCTCGGCCTG ACCGGCGACG AGGCCACCGG TGTCGCCCTG
GTCCGCGAGG CACTGGGCGC CCCGCTGTTC TGGATCGCCG CGAACGGCGG CCAGGAGGGC
GCGGTCGCGG TCAACAAGGT CCGCGAGGCC GACTGGGGCT TCGGCCTCAA CGCCGCGACG
CTGACCTACG GCGACCTGCT CGAGGCGGGC ATCATCGACC CGGTGAAGGT GACCCGCTCC
GCGGTCACCA ACGCCGCCTC GATCGCCCGC ATGGTGCTCA CCACGGAGAG CGCCATCGTG
GAGAAGAAGG AAGAGGAGCC CGCCGGGGCC GGTGGCCACG GCCACGGGCA CGGCCACGGG
CACTGA
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| Protein sequence | MPKQISFDED ARRALERGVN KLADTVKVTL GPRGRHVVLD KKFGGPTVTN DGVTIAREIE
LDDPFENLGA QLAKSVATKT NDIAGDGTTT ATVLAQAMVR VGMRNVAAGA NPTALGKGVQ
AAADAVVDAL KAKATPVKGR DNIAQVGTVS SRDESIGSLL GEAIEKVGED GVITVEESST
MATELHITEG VQFDKGYVSA HFATDLEAQE TVFEDARILL HREKISALAD LLPLLEKVAE
AGKPLVIIAE DVEGEALSTL VVNALRKTLR VVAVKAPFFG DRRKAFLDDL AVVTGGQVIA
AEVGLKLSEA GLDVLGAARR VVVSKDNTTI VDGAGAKADV AGRAEQLRRE IEASDSDWDR
EKLQERLAKL SGGIAVIKVG AATETELKER KHRIEDAVAA TKAAVEEGIV PGGGSALIHA
SKVLDGGLGL TGDEATGVAL VREALGAPLF WIAANGGQEG AVAVNKVREA DWGFGLNAAT
LTYGDLLEAG IIDPVKVTRS AVTNAASIAR MVLTTESAIV EKKEEEPAGA GGHGHGHGHG
H
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