Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6542 |
Symbol | |
ID | 8330754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7685149 |
End bp | 7685484 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644946970 |
Product | transcription factor WhiB |
Protein accession | YP_003104188 |
Protein GI | 256380528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.266206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGT TCCCGTCCGT GGCCAAGGAG GCGGTCTCGA TGGCGGACAC CCGAAGGCTC CCCGGTCCCA ACGCCGATCT CTGGGACTGG CAGATGCGCG GCTCCTGCCG CGGGATGGAC AGCGCGTTCT TCTTCCACCC CGACGGGGAA CGCGGACCGG CACGAGCCAG ACGGGAGGCA CGGGCGAAGG CCGTCTGCCT GTCCTGCCCC GTGCTGGAGA TGTGCCGCAG GCACGCCCTT GCCGTGCAGG AGCCGTACGG CATCTGGGGC GGCCTCTCGG AATCCGAGAG GGACGGGATC ATCAAGGCAA GGAAGCGCAG GCTCACCCTC ACCTGA
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Protein sequence | MEQFPSVAKE AVSMADTRRL PGPNADLWDW QMRGSCRGMD SAFFFHPDGE RGPARARREA RAKAVCLSCP VLEMCRRHAL AVQEPYGIWG GLSESERDGI IKARKRRLTL T
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