| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6478 |
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| Symbol | |
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| ID | 8330689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7614279 |
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| End bp | 7615499 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644946906 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003104125 |
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| Protein GI | 256380465 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGA TCAAGGTTCA GGGGACTGTC GTCGAGCTCG ACGGCGACGA GATGACCAGG
ATCATCTGGC AGTTCATCAA GGACAAGCTG GTCCACCCGT ACCTGGACGT CAACCTCGAG
TACTACGACC TGGGCATCGA GCACCGGGAC GCCACCGACG ACCAGGTCAC CATCGACGCG
GCCAACGCGA TCAAGAAGCA CAACGTGGGC GTGAAGTGCG CCACCATCAC GCCGGACGAG
GCGCGGGTGG AGGAGTTCGG CCTCAAGAAG ATGTGGGTCT CGCCCAACGG CACGATCCGC
AACATCCTCG GCGGCGTGGT CTTCCGCGAG CCGATCATCA TCTCGAACAT CCCCCGGCTC
GTCCCCGGCT GGACCAAGCC GATCATCATC GGCCGCCACG CCCACGGCGA CCAGTACAAG
GCCACGAACT TCAAGGTCCC CGGCGCGGGC AAGCTGACCG TGACCTTCAC GCCCGAGGAC
GGCTCCGCGC CGATCGAGCA CGTCGTCGCC AACTACGGCG CCGACGGCGG CGTGGCCATG
GGCATGTACA ACTTCAACAA GTCCATCGAG GACTTCGCGC GGGCCTCGTT CTCGTACGGC
CTGCAGCGGA ACTACCCGGT GTACATGTCG ACCAAGAACA CCATCCTCAA GGCGTACGAC
GGCGCCTTCA AGGACATCTT CCAGCAGGTG TTCGAGGCCG AGTTCAAGGC CGAGTTCGAC
GCCAAGGGGC TCACCTACGA GCACCGCCTC ATCGACGACA TGGTCGCCGC GGCCATGAAG
TGGGAGGGCG GCTACGTCTG GGCGTGCAAG AACTACGACG GCGACGTGCA GTCCGACACG
GTCGCGCAGG GCTTCGGGTC GCTCGGCCTG ATGACCTCCG TGCTGATGAC CCCGGACGGC
AAGACCGTCG AGGCCGAGGC CGCGCACGGC ACCGTCACCC GGCACTTCCG CCAGCACCAG
GCGGGCAAGC CGACCTCCAC CAACCCGATC GCGTCGATCT TCGCCTGGAC CGGTGGCCTT
AAGCACCGCG GCAAGCTCGA CGGGACCCCC GAGGTCACCG GGTTCGCGGA GACGCTGGAG
AAGGTCATCA TCGAGACCGT CGAGAGCGGC AAGATGACGA AGGACCTCGC GCTGCTGGTC
GGTCGTGACC AGGAGTGGCA GACCACGGAG GACTTCCTCG CCACGCTGGA CGAGAACCTC
CAGAAGAAGA TGGCGGGCTG A
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| Protein sequence | MGKIKVQGTV VELDGDEMTR IIWQFIKDKL VHPYLDVNLE YYDLGIEHRD ATDDQVTIDA
ANAIKKHNVG VKCATITPDE ARVEEFGLKK MWVSPNGTIR NILGGVVFRE PIIISNIPRL
VPGWTKPIII GRHAHGDQYK ATNFKVPGAG KLTVTFTPED GSAPIEHVVA NYGADGGVAM
GMYNFNKSIE DFARASFSYG LQRNYPVYMS TKNTILKAYD GAFKDIFQQV FEAEFKAEFD
AKGLTYEHRL IDDMVAAAMK WEGGYVWACK NYDGDVQSDT VAQGFGSLGL MTSVLMTPDG
KTVEAEAAHG TVTRHFRQHQ AGKPTSTNPI ASIFAWTGGL KHRGKLDGTP EVTGFAETLE
KVIIETVESG KMTKDLALLV GRDQEWQTTE DFLATLDENL QKKMAG
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