Gene Amir_6472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6472 
SymbolfbiC 
ID8330683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7609384 
End bp7611900 
Gene Length2517 bp 
Protein Length838 aa 
Translation table11 
GC content75% 
IMG OID644946900 
ProductFO synthase 
Protein accessionYP_003104119 
Protein GI256380459 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 
TIGRFAM ID[TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCCGTGG ACATCCCGAT CACCCCGCCC TCTCCGGCGC CCAGCGCCGC CGCCCTGCGG 
CGCGCCCTGC GGCGGGCCGC CGACGGGGCC GTGCTCGACG CCACCGAGGC CGCCGTCCTG
CTGCACGCGC GCGGGGACGA CCTCGACTCG TTGCTGGCCT CCGCCGCCAA GGTGCGGGAC
GCCCACCTGC TCGCCGAGGG GCGGGCCGGG GTCGTCACCT ACAGCCGCAA CGCGTTCATC
CCGCTCACCC GGCTCTGCCG GGACCGGTGC CACTACTGCA CGTTCGCCAC CGCCCCGCAC
AAGCTCGACG CGCCCTTCCT GGAGCGCGAC GAGGTCGTCG CCATCGCCCG CGAGGCCGCC
GCCGCCGGGT GCAAGGAAGC GCTCTTCACC CTCGGCGACC GGCCCGAGGA CCGGTGGCAC
CAGGCCAAGG AGTGGCTCGA CGCGCGCGGC TACTCGTCCA CGCTCGACTA CCTGCGCTCG
TGCGCCATCG CGGTGCTGGA GGAGACCGGG CTGCTGCCGC ACCTGAACCC CGGCGTGCTC
AGCTGGGAGG AGTTCCAGCG GTTGCGGCCG GTCGCGGCCA GCATGGGGAT GATGCTGGAG
ACCACCTCCG AGCGGCTCTG GAGCGAGAAG GGGCAGCCGC ACCACGGCAG CCCCGACAAG
GAGCCCGCGG TGCGGCTGCG GGTGCTCACG GACGCGGGGC GGGTGAACGT GCCGTTCACC
ACGGGCATCC TCATCGGCAT CGGCGAGACC ATCGCCGAGC GGGCCGAGTC GCTGCTGGCC
ATGCGGGCCG TCGCGCGCCA GTACGGGCAC GTGCAGGAAG TGATCATCCA GAACTTCCGG
GCCAAGTCCG ACACCGCCAT GCGCTCCACG CCGGACGCCG ACCTGAACGA GCTGGCCGCC
ACGATCGCCG TCGCCCGGCT GGTCATGCCG TCCACGACCA GCGTGCAGGC CCCGCCGAAC
CTGGTCGGCG ACGAGTTCGG GCTCATGCTC CGCGCCGGGA TCGACGACTG GGGCGGCGTG
TCGCCGGTCA CGCCCGACCA CGTCAACCCC GAGCGGCCCT GGCCGCAGGT CGACCGGCTC
GCCGAGGTCA CCCGCGAGGC CGGGTTCGAG CTGCGCGAGC GGCTCGCCGC CTACCCCCGG
TACACCCGCG CCACCCCCGG CCAGTGGATC GACACCCGGC TCACCGCGCA CGTCGCCGCC
CTCGCGGGCG AGGACGGGCT GGCCGTCCCG GACGCGCCCG TCGTCGGCCG CGAGTGGCAG
GAGCCCGACG CGGCCGACAC CACCGGGCGC GCCGACCTGC ACACCGCCGT CGACACCGAG
GGCCGCACCG GCGACCGGCG CGGCGACTTC GACAGCGTCT ACGGCGACTG GTCCGCGCTG
AGCGTGCCCA AGGCCGTCGA GCGCCTCCCC GAGGACACCG CCCGCGCCCT GCGCCTGGCC
GCCGACGCCC CGCACCGCCT CCTCGACGAC ACCGACGCCG CCATGGCCCT GCTCACCGCC
GACGGGCCCG CCCTGGAGGC CATGGCCCGC CTCGCCGACG ACCTGCGGGC CGACGCCGTG
GGCGACGACG TGACCTACGT GGTCAACCGC AACATCAACT TCTCCAACGT CTGCTACGTC
GGCTGCCGCT TCTGCGCCTT CGCCCAGCGC GAGCGCGACG CGGACGCGTT CCGGCTGTCC
ACCGACGAGG TCGCCGAGCG CGCCCACGAG GCGTGGCTGG AGGGCGCCAC CGAGATCTGC
ATGCAGGGCG GCATCGACCC GCGGCTGCCG GTGACGTACT ACGCCGACGC CGTGCGCGCC
ATCAAGCGCC GCGTTCCGGG GATGCACGTG CACGCCTTCA GCCCCATGGA GATCGTCAGC
GCCGCCGCCA AGGCGGGCGC CAGCGTCCGC GACTGGCTCA CCGAGCTGCG CGAGGCCGGC
CTGGACACCA TCCCCGGCAC CGCCGCCGAG ATCCTCGACG ACGACGTCCG CTGGGTCCTC
ACCAAGGGCA AGCTGCCCAC CGCGACCTGG CTCGACGTCG TCGGCACCGC GCACGAGCTG
GGCATCCGCT CCTCGTCCAC GATGATGTAC GGCCACGTCG ACCACCCCGG CCACTGGCTC
GGCCACTTCC GCGTCCTGGC GGGCCTGCAG GACCGCACCG GCGGCCTCAC CGAGTTCGTC
GGCCTGCCGT TCGTGCACCG CAACGCCCCC ATCTACCTGG CGGGCGTCGC CCGGCCCGGC
CCCAGCCGCC GCGACAACCG GGCCGTGCAC GCCTTCGCCC GCATCGCGCT GCACGGCCGG
GTCCCGAACA TCCAGTGCTC CTGGGTCAAG CTCGGCGACG AGGGCACCGC CGAGGTGCTG
CGCGGCGGGG CCAACGACCT GGGCGGCACG CTCATGGAGG AGACCATCAG CCGCATGGCG
GGCTCCGAGC ACGGCTCCGC GCGCAGCACC GCCGAGCTGG CCGCGACCGC CGCCCTCGCG
GGCAGGCCCG CCCGCCAGCG CACTACGACG TACGGCCCAG CGGGGGTCGC CGGGTAG
 
Protein sequence
MPVDIPITPP SPAPSAAALR RALRRAADGA VLDATEAAVL LHARGDDLDS LLASAAKVRD 
AHLLAEGRAG VVTYSRNAFI PLTRLCRDRC HYCTFATAPH KLDAPFLERD EVVAIAREAA
AAGCKEALFT LGDRPEDRWH QAKEWLDARG YSSTLDYLRS CAIAVLEETG LLPHLNPGVL
SWEEFQRLRP VAASMGMMLE TTSERLWSEK GQPHHGSPDK EPAVRLRVLT DAGRVNVPFT
TGILIGIGET IAERAESLLA MRAVARQYGH VQEVIIQNFR AKSDTAMRST PDADLNELAA
TIAVARLVMP STTSVQAPPN LVGDEFGLML RAGIDDWGGV SPVTPDHVNP ERPWPQVDRL
AEVTREAGFE LRERLAAYPR YTRATPGQWI DTRLTAHVAA LAGEDGLAVP DAPVVGREWQ
EPDAADTTGR ADLHTAVDTE GRTGDRRGDF DSVYGDWSAL SVPKAVERLP EDTARALRLA
ADAPHRLLDD TDAAMALLTA DGPALEAMAR LADDLRADAV GDDVTYVVNR NINFSNVCYV
GCRFCAFAQR ERDADAFRLS TDEVAERAHE AWLEGATEIC MQGGIDPRLP VTYYADAVRA
IKRRVPGMHV HAFSPMEIVS AAAKAGASVR DWLTELREAG LDTIPGTAAE ILDDDVRWVL
TKGKLPTATW LDVVGTAHEL GIRSSSTMMY GHVDHPGHWL GHFRVLAGLQ DRTGGLTEFV
GLPFVHRNAP IYLAGVARPG PSRRDNRAVH AFARIALHGR VPNIQCSWVK LGDEGTAEVL
RGGANDLGGT LMEETISRMA GSEHGSARST AELAATAALA GRPARQRTTT YGPAGVAG