Gene Amir_6461 details

Gene Information

• Locus tag: Amir_6461
• ID: 8330672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 7595856
• End bp: 7599962
• Gene Length: 4107 bp
• Protein Length: 1368 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 644946889
• Product: hypothetical protein
• Protein accession: YP_003104108
• Protein GI: 256380448

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGCGGCG ACGGCGACGG CCCGCAGGAG GTGCCGGTCA CCACCCCGGA CGGCGCCACC 
GGCTACCCGT GGCGCGGCCC GATCGCCTGC GACATCAGGG ACTTCACCGC CGACGGCTCC 
CCGGTGCGCG ACTTCACCGT GCGCCTGCAC CTGGACACCC TGGCCCCCGA CCTGGAGGCC 
CGCGCCTGCC TGGGCGTGGA GGAGCTGTTC AACCGGGGCA ACCGGCTGCC CGGCGGCGAG 
CAGTTCCACG TCACCGTCGA GTTCACCGAC AGCCCCACGT CCGCGCACGC CAGCATCGTG 
GTCACCGACC GGGGCCGCCC CGGCCAGCTG ACCTGGCCGT CCGGCACCGG CAGCCGCAGG 
CTCGCCCACG AGGTCGGCCA CTTCCTCGGC CTGCCGGACA CCGCGGGCAC CGCGCCCAGC 
GCGGTCGGCG AGCTGCGCCC GGCGGACCTG TGGCTGGTCG ACCACCTGAC CCGCGCGATG 
GCGACCGCGA CCGAGCCGGT CAAGGGCGGT TGGGGCACCG GCGACGAGCC GCAGGAGCAG 
CGGCTCACCC CGCAGCGGCT GCGCGACGAG TTCGGCGTGC CGCCGGTGGA CCAGCTGCGG 
TTGCAGGCGC TGGCGAAGAA CACCTCGCTG AGCTTCGACG TGCCGACCGC GAACCCGGAC 
GCGCTGGCCT GGCTGTTCCA GGGCGCCGTG GTGCGCCCGG AGGGCCTGGG CGGGCGCACC 
GTCACGGACC TGGACCTGCA CCTGGGCGCG CGCCCGGAGA CCATCGGCCT GCTCGCGCAC 
TTCTCCCCCG CCCCGCCCGG CGAGCTGTCC GGGCTGGACC CGGCGACCGT GGAGCGGGTG 
CGGCAGCGGC ACAGCACGCG CGTCGAGGAG CACGCGGCGC AGGAGGCCGA GTTCGCCGAC 
CAGATCGCGT CCGGCTGGGT GCGGATGCGC GAGGGCGGCG TCGTCGAGGT CGCCACGACC 
GAGGGCTTCC GGCCCGCGAT CGACCTGAAC GACGCGTTCC ACCTGCACCT GGCGGGCAGC 
GCCGACACGC TCGTGGTGGA CGACCGGGAG CTGGCCGCGC TGGTCCCCGG CAGGCACCAG 
CGCGGCGCGT ACCGGGTGGA CGACCGGGGC ACGGCGACGC CCGTGCTGCC CGCGACCATG 
GCGCAGAACC CGATGCTGCG GTTCCGGCCG AACGCGCACC CGACGCTGGT GCCGCCCGGC 
GAGGAGCTGG CGGTGACGGC GGAGCGGCTG CGCGCCGAGG GCGGCGAGCT GAGCCTGGCG 
GTGCTGGAGC TGCCGCTGGC CCCGCACCGG CTGGCAACGC TGCTGCACGA GGCGCACGGC 
ATGGCGGTCC GGTTCGGCGG CCCCGGTTCG GCGCCCGCCG TGCCGGACGT GGCGCACCTG 
GCGCTGGTGC TGCACGACCG GGGCGGCACG GCCGCCGAGG CGGCGGCGCG GGCGCTGGCG 
ACGACGGCCG AGGACCGGGA CGCGCAGCCC GCGAGCACGG GCCTGATCGG CGCGGTCGGC 
GGACCGGGGC GGCCCGCGAA CAGCGAGGAC GGCAACCTGG CCGAGGTGCG CCCGGTCGCG 
GTGGCGTTCC CGAGGGGCTC GGCGGTGCCG GAGCTGGGCG CGGAGGCCGC GATGGAGCCG 
ATCGCGCTGC GCCTGGCGCA CTCGGCGGTG TGGCGGCACG CGAACGGGCT GGCGCCCGCG 
CGGATCACCG TGACCGGCTA CGGCAACACC ATGCCGGGCG TGTTCGGCAA CGCGATGGAG 
ACCGGCCAGG CCCGCGCGGA CGCGGTGACG AACCTGCTGC GGCTGCTGGT GTCCCGGCAG 
CTGCGCAGGC TGGTCGGCAC CGGGTCGGCG GCGCCGCTGC CGGAGATCAG GGCGGTGTCC 
GGCGGCGACG ACCTGTCCGG GACCGCGCAC GACGAGGGCG CGCCGGAGCT GGAGCGCCGC 
CGCCGCGCGG TGATCGCGGT GGCCCCCGCG CCGGTGGCCC CGAAGGAGTC GACCGAGTCG 
GTCGACGTGC GGCACGCGAT CAGCGCGACC GAGCGGCGGC TGGTGGTGGC GAGGGCGCTG 
CTGGCGACCG GTCGCCGGGA GCTGGCGCTG CTGGACACGA CGCTGCGCGC GCGGGTGGAG 
ACGCTGCTGG TGGCGGGCGC CGGTCGGCAC AGCGCCGACC TGAGCGGGCC CGGCGCGGAG 
CGGGTCGTGC TGGCCGAGCG GGTCGCGGGT CTGGAGCACG GGCTGGAGCG GGAGAACGCG 
CTGCTGGGCG TGTGGCGCAG GCTGCTGGAG CAGATCCGCT CCGGCGGGCT GGTGGCGCCG 
CGCGGGCCGT CGGCGGCGCA CCGGGTGCTG GAGTGGGCGC AGCGGGTGGG GGCGGTGCGG 
GACGCGCTGG CCGACCCGGA CGCGCGCGGG CACCGGGACC AGACCGTGGC GCAGCACCTG 
GGGCGGGTCG CGGACGTGCT CGACGGCAGG CCCCGGTTGT CGCCGGGCGG CAGGCTGATC 
CCGGCGGCGT CCGGGGTGGA CCGGTTGACG CCGCCGCAGC GCGACGCGGT GGCGCTGGCC 
GCCGCGGTGG ACGGCGCGGC GGCGGACATG GCGGCGGCGT GGCGGGACGT GCCGCTCAAG 
CCGGTGCTGG CCAGGCAGGT GCTGCGGGCG GGCGTGCCGA GGCTGCTGGA GGGCGACGGG 
TCGCCCGCGG GCAAGGAGGT CGTGCGGCTG GCCGTGGCGC TGGTGTCGGA CGACCCGCTG 
CGCGCGCACC TGGCCGGGGC GCTGGACGCG ACCACGGCGG CCACCAGGGT GGTCGCGGTG 
GCCGAGCAGG CGGGCATCGC GCCGGTGGAG GCGTTCGACC TGCTGCGGCT GCGCTGCGAG 
GCGGAGCTGC TGGCCGAGAC GTGGGGCGAG GTGTACGCGG GCGTGCTGCG CCCGGAGGTC 
GGGGAGCGCG GCGGGTTCGC GCTGGCCGCC GACGTGGACC CCGGTCCGCG CCCGGAGCGG 
CTGCGCAGGC TGGTGCACGT GGTGCGGGAC GCGTTGGGCG CGGGCGGCGA GAACGGGCTG 
CTGGCGCTGT CCCCGGCGGC GGCCGAGGTG CTGCGGGAGC TGCGGGAGGC GCTGCCGACG 
GCCTCGTCGG CGCAGCCGCG CGAGTCCGGC CTGCCGGGGC GGACGTCGAC CGACCCGGAC 
GTGGTGCCGT TCCCCGGCTC GCCCGCGGCG GGCGCGCTGA CGCCCCGGCA GCACCTGCTG 
CTGCGGTCGG TGCGGCTGCG CAGCGGGACG GGCGCGGAGG CGCTGCGGCA GGAGGTGCTG 
GCGCGGCTGT CGCCGCTGTG CGGCAACCAG TTCCCCGAGG CGGTGCTGGA GCGGGTGGAG 
GACTGGTTCG CGACCGCGCC GATCACCGTG ACGCTGCGGG CGCGCGAGGT GCTGGCGGCG 
GACGCGGGCG GGGCGCTGCG GCTGCGCGGG GCCCGGTTGC CGGTGCCCGC CGAGGCGGGG 
CTGCGCCGGG TGGACCGCAA GAGCCTGGAG GGGCTGCGGG AGACCGGGTT CGACCTGTCC 
GGGCCGCAGG CGACGGCCGA GCGGGCGCGG CGGCAGGCGG CGCACCTGGA GCAGCTGCTG 
GCCGGTGACC ACGCGTTCGC GTTCTGGACC GCGCCGGGCG GGCAGGTCGG TCCGGTGGGG 
CGCTACGAGT GGGACGCGCA GTGCGTCGAC CGGCGGGAGC TGGGGCCGCT GGTGGGCGAG 
GCGACCGGGC TGGTGCACCC CGACCACGCG CACGCGCTGC GGCTGCGGGC GGACCCGAGG 
CGGGGCGAGG CGCACCTGCT GCTGAAGCCG GAGGCGAGGC GGCGGGCGTA CTTCAGCCAC 
ACGGGGCGGG GCGCGCCGAC GTCGAGCCCG GTGGAGCTGC TGCACGCGCT GCTGTCCGAG 
GGCGGGGTGG GCGAGCGGCA CGCGCGCGCG GTGCTGGCGG CGGCCACCGG TCAGCGGCCG 
GAGCAGCGGG GCGCGCACGA CGCGGTGTGG CAGGCGACCG CGCCGGTGAT CGCGGCGCAC 
GTGTGCGGCG GGATCGACCT GTCGCGGGAC GTGGAGCGGC TGGCGCTGCC CTCCAGCGGT 
CTGGACAAGT CGACGACCAC GAAGCTGCGG TCGGTGGCGG GCGCGCACGG CGTCCCCGTG 
GTGGAATACG ACCCGGAGGG CCGGTAG 

 

Protein sequence

MRGDGDGPQE VPVTTPDGAT GYPWRGPIAC DIRDFTADGS PVRDFTVRLH LDTLAPDLEA 
RACLGVEELF NRGNRLPGGE QFHVTVEFTD SPTSAHASIV VTDRGRPGQL TWPSGTGSRR 
LAHEVGHFLG LPDTAGTAPS AVGELRPADL WLVDHLTRAM ATATEPVKGG WGTGDEPQEQ 
RLTPQRLRDE FGVPPVDQLR LQALAKNTSL SFDVPTANPD ALAWLFQGAV VRPEGLGGRT 
VTDLDLHLGA RPETIGLLAH FSPAPPGELS GLDPATVERV RQRHSTRVEE HAAQEAEFAD 
QIASGWVRMR EGGVVEVATT EGFRPAIDLN DAFHLHLAGS ADTLVVDDRE LAALVPGRHQ 
RGAYRVDDRG TATPVLPATM AQNPMLRFRP NAHPTLVPPG EELAVTAERL RAEGGELSLA 
VLELPLAPHR LATLLHEAHG MAVRFGGPGS APAVPDVAHL ALVLHDRGGT AAEAAARALA 
TTAEDRDAQP ASTGLIGAVG GPGRPANSED GNLAEVRPVA VAFPRGSAVP ELGAEAAMEP 
IALRLAHSAV WRHANGLAPA RITVTGYGNT MPGVFGNAME TGQARADAVT NLLRLLVSRQ 
LRRLVGTGSA APLPEIRAVS GGDDLSGTAH DEGAPELERR RRAVIAVAPA PVAPKESTES 
VDVRHAISAT ERRLVVARAL LATGRRELAL LDTTLRARVE TLLVAGAGRH SADLSGPGAE 
RVVLAERVAG LEHGLERENA LLGVWRRLLE QIRSGGLVAP RGPSAAHRVL EWAQRVGAVR 
DALADPDARG HRDQTVAQHL GRVADVLDGR PRLSPGGRLI PAASGVDRLT PPQRDAVALA 
AAVDGAAADM AAAWRDVPLK PVLARQVLRA GVPRLLEGDG SPAGKEVVRL AVALVSDDPL 
RAHLAGALDA TTAATRVVAV AEQAGIAPVE AFDLLRLRCE AELLAETWGE VYAGVLRPEV 
GERGGFALAA DVDPGPRPER LRRLVHVVRD ALGAGGENGL LALSPAAAEV LRELREALPT 
ASSAQPRESG LPGRTSTDPD VVPFPGSPAA GALTPRQHLL LRSVRLRSGT GAEALRQEVL 
ARLSPLCGNQ FPEAVLERVE DWFATAPITV TLRAREVLAA DAGGALRLRG ARLPVPAEAG 
LRRVDRKSLE GLRETGFDLS GPQATAERAR RQAAHLEQLL AGDHAFAFWT APGGQVGPVG 
RYEWDAQCVD RRELGPLVGE ATGLVHPDHA HALRLRADPR RGEAHLLLKP EARRRAYFSH 
TGRGAPTSSP VELLHALLSE GGVGERHARA VLAAATGQRP EQRGAHDAVW QATAPVIAAH 
VCGGIDLSRD VERLALPSSG LDKSTTTKLR SVAGAHGVPV VEYDPEGR