Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6456 |
Symbol | |
ID | 8330667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 7558574 |
End bp | 7560247 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644946884 |
Product | hypothetical protein |
Protein accession | YP_003104103 |
Protein GI | 256380443 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAGTCA TGAACATCAC CGAGGAGAAC GAGCTCAAGG GCTCCCTCTT CATCTCGGCG TTCGACGAGC TGATCGACTC GGTGGGCAAG GAGGCCGAGA CCGAGACCGA GCACGTCCTC GACATCACCT TCGCCGCCAT CGGCGCGGCG TCGTCGCTGG CGATGCTGGC CGTCGACCCG TTCGGCACGA TCCTGGGCGC GGGCATCGGA TGGCTCATCG AGCACCTGGT GTTCCTGCGC GAGCCCCTGG ACATGCTCAT GGGCGACCCC GACGACATCA ACGCGAACGT CGAGGCGCAC AAGGCGCAGG CGGCCGAGAT GCGGGTGCTG GCGGAGGACC ACCGCAAGGG CCTGACGAAC GTCGACGGCT GGAGCGGCCA GTCCGCCGAG AGCTTCCAGA AGAACATGGA GGCCCTGGGC GGCGAGCTGG ACTCGCTGGC CAACTCGGTC GAGACCAAGG CGAAGATCGT CGCGATCTGC GGGATGCTCG TGCAGGTCCT GCGCGACATC GTCCGCGACA TGATCGCCCA GTTCCTGGGC TCCCTGCTGG CCGGCGCGAT CGCCGCCGCA GCCGCCGCGT TCTTCACGTT CGGCGCGTCC ATCGCGGGCT TCATCGGGTA CGCGATCGGC AAGGCCGTCG CGCTCGGCGT CAACATCGCC TCGCGCCTGG CGAAGCTGAC CGCCGCGCTG TCGCGCCAGA TGGGCCGCAT CAAGAACCTG GACGAGATCA CCGACGGCAT CGGCAAGAAC TGGAAGCGGT TCGAGAACGT CGCCGACGTC GCCGAGGTCA GCTACGAGGC CTGGAAGGCG CAGAAGGGCG TCGACCGCAA GATCGACGAG GCCCTGGAGC AGGACGCGAT CCAGGACAAG CAGACGGAGG AGGGCAAGAA GGTCTCCGAC GCCAGCGACA AGGCCAAGGC CGCCAACGAC AAGTACTCCG AGTACAAGGA GGCCGAGACC AAGGCCTCCG AGTCCGCGTC GAAGGCCAAC GAGGAGCTGA ACACCGCCTC GAAGAAGGCG GGCGACGCCA ACACCAAGGT CCAGTCGGCG ATCGACGAGG CCAACGCGGC CAGCGCGCGC GGCGACCAGG CCGGTTACGA CGCCGCCATG GCCAAGTACG ACAGCGCCAA GTCCGAGGCC GACTCGGCCC GCGCCGACGC CGCCCGCGCC GCCGACAAGG CGGCCGAGGA GGCCAGGAAC GTCGCGGACG CGGCCGAGAA GAGCCAGAAG GCGCTCGACG ACGCGAAGCC CGCGGACCAG GCCGCGAAGG ACGCGTACAA CGAGTACAAG AAGAACAACC CGAGCGGCGA CGAGGCGCGG GACAAGGCCG AGACCGAGCT GACGTCCAAG AACGACGCCG CGAAGGAGGC CAACTCCGCG TACGAGAAGG CCAGCCTCGA CGCGGCCAGG GCGAACGCGG CGGCGGCCGA GGCCAACGCC AAGGCGTACG CCTCGGGCAG CGACGCGGAC ATCGCGGCGG CCGACAAGGC CAGCCAGGCG GCCGAGGCGG CGGGCAAGAA GGCCGAGACC GCGGCGAACG ACGCCAAGTC GGCGGGCACG GCGGCGGAGC AGAGCTTCAC CGAGTTCGAG AAGAAGTACC CGTCCGGCGA GGGCAGCGGC GGCGGCGACG GGCAGGGGTC GCCCAAGGGC GGCAGCCCCG CGGTCACCAC CTGA
|
Protein sequence | MEVMNITEEN ELKGSLFISA FDELIDSVGK EAETETEHVL DITFAAIGAA SSLAMLAVDP FGTILGAGIG WLIEHLVFLR EPLDMLMGDP DDINANVEAH KAQAAEMRVL AEDHRKGLTN VDGWSGQSAE SFQKNMEALG GELDSLANSV ETKAKIVAIC GMLVQVLRDI VRDMIAQFLG SLLAGAIAAA AAAFFTFGAS IAGFIGYAIG KAVALGVNIA SRLAKLTAAL SRQMGRIKNL DEITDGIGKN WKRFENVADV AEVSYEAWKA QKGVDRKIDE ALEQDAIQDK QTEEGKKVSD ASDKAKAAND KYSEYKEAET KASESASKAN EELNTASKKA GDANTKVQSA IDEANAASAR GDQAGYDAAM AKYDSAKSEA DSARADAARA ADKAAEEARN VADAAEKSQK ALDDAKPADQ AAKDAYNEYK KNNPSGDEAR DKAETELTSK NDAAKEANSA YEKASLDAAR ANAAAAEANA KAYASGSDAD IAAADKASQA AEAAGKKAET AANDAKSAGT AAEQSFTEFE KKYPSGEGSG GGDGQGSPKG GSPAVTT
|
| |