Gene Amir_6453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6453 
Symbol 
ID8330664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7554688 
End bp7556232 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content71% 
IMG OID644946881 
ProductABC transporter related 
Protein accessionYP_003104100 
Protein GI256380440 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC CGACCCCTGC TGTCGTCCTG TCGGGGATCA CCAAGCGCTT CCCCGGCGTC 
GTGGCGAACA GCGACGTCCA CCTGAGCGTC GCCCAGGGCG AGGTGCACGC GCTGTGCGGT
GAGAACGGCG CGGGCAAGTC CACCCTGATG AAGATCCTGT ACGGGATGCA GCAGCCCGAC
GAGGGCGCCA TCGAGGTCAA CGGCGAGCAG GTGCGGTTCC GCAGCCCCGC CGAGGCCATC
AAGGTCGGCA TCGGCATGGT GCACCAGCAC TTCATGCTCG CCGACAACCT GACCGTGCAG
GAGAACGTGG TCCTCGGCGC GGAAGCGCTG CACGGCATCG GCGCCAGGGC GCGCAAGCGC
ATCCTCGAAC TGGCGGGCCA GACCGGCCTG TCCGTCGACC CCGGCGTCCT CGTGGAGCGG
CTGGGCGTCG CGGACCGGCA GCGGGTCGAG ATCCTCAAGG TCCTCTACCG GGGCGCCAAG
GTCATCATCC TCGACGAGCC GACCGCCGTC CTCGTGCCGC AGGAGGTGAA CGAGCTGTTC
GACACCCTCC GGGGGATGCG CGAGCAGGGC TACACCTTCC TGTTCATCTC GCACAAGCTG
GACGAGGTCC GCTCGATCGC CGACTCGGTC ACCGTCATCC GGCGCGGCAC CACCGTCGGC
ACCGCCGACC CCCGGACCAC CAGCTCCCGG CAGCTCGCCG AGATGATGGT CGGCTCCGAG
CTGCCCAGCC CGGAGACCCG CGAGTCCACC GTGACCGACC GCGCCGTGCT GGTCGTCGAC
GACCTCGGCC TGGTCGCCGA GGAGGGCGCC CGACCGGTGC TCGACCACAT CGACCTCACC
GTGCACGCGG GCGAGATCGT CGGCATCGCG GGCGTCGAGG GCAACGGTCA GACCGAGCTG
GTCGAGACCA TCATGGGGAT GCGCAAGGCC CACCACGGCT CTGTCCGGCT GGGCGAGCGC
GACATCACCA AGCTCGGCAC GCTCGCCCGC CGCGAGGCGG GCATCGGCTA CGTGCCCGAG
GACCGGCACC GGCAGGGCCT GCTCCTGGAG GAGCCCCTCT GGGCCAACCG CATCCTCGGC
CACCAGACCC GCAAGCCCGC CTCGCGCGGG CCGTGGCTGG ACATCGCGGG CGCGAAGAAG
GACACCCAGC GCATCGTCGA CGAGTTCGAC GTGCGCACCC CCGGCATCGA GGTGGCGGCC
GTCGCGCTGT CCGGCGGCAA CCAGCAGAAG CTGGTCGTCG GCCGCGAGCT GTCCGGCGAC
CCCGTGCTGC TGATCGCCTC GCACCCCACG CGCGGCGTCG ACGTCGGCGC GCAGGCCCTG
ATCTGGGACC AGATCAAGCA GGCCCGCGCG AACGGCCTGG CCGTGCTGCT CATCTCCGCG
GACCTGGACG AGCTGATCGG CCTCTCGGAC ACGATCAAGG TCATGCTGCG CGGCAGGCTC
GTCGCCGACG CCGACCCGAG CGCCGTCACC CCTGAGGACC TCGGAAGCGC CATGACCGGC
GCGGGCGCGA CCAGCTCGGC GGTCGCGGAA GTGGAAGGCG AGTAA
 
Protein sequence
MSKPTPAVVL SGITKRFPGV VANSDVHLSV AQGEVHALCG ENGAGKSTLM KILYGMQQPD 
EGAIEVNGEQ VRFRSPAEAI KVGIGMVHQH FMLADNLTVQ ENVVLGAEAL HGIGARARKR
ILELAGQTGL SVDPGVLVER LGVADRQRVE ILKVLYRGAK VIILDEPTAV LVPQEVNELF
DTLRGMREQG YTFLFISHKL DEVRSIADSV TVIRRGTTVG TADPRTTSSR QLAEMMVGSE
LPSPETREST VTDRAVLVVD DLGLVAEEGA RPVLDHIDLT VHAGEIVGIA GVEGNGQTEL
VETIMGMRKA HHGSVRLGER DITKLGTLAR REAGIGYVPE DRHRQGLLLE EPLWANRILG
HQTRKPASRG PWLDIAGAKK DTQRIVDEFD VRTPGIEVAA VALSGGNQQK LVVGRELSGD
PVLLIASHPT RGVDVGAQAL IWDQIKQARA NGLAVLLISA DLDELIGLSD TIKVMLRGRL
VADADPSAVT PEDLGSAMTG AGATSSAVAE VEGE