| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6449 |
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| Symbol | deoA |
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| ID | 8330660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7550646 |
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| End bp | 7551920 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644946877 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_003104096 |
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| Protein GI | 256380436 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCACA CCGCTGTCGA CGTCATCAGG GCGAAGCGCG ACGGGCTCCG GCTCACCGAC
GGCCAGGTCG ACTGGGTCGT CGACGCCTAC ACCAGGGGCG AGGTCGCCGA CGAGCAGATG
TCCGCGCTCG CCATGGCGAT CTTCCTCAAC GGCATGGACG CCGCCGAGAC GGCCCGCTGG
ACCAGGGCCA TGATCGCGTC CGGCGACGTG CTGGACCTGC GGGTCGACCG CCCCACGGTG
GACAAGCACT CCACCGGCGG CGTGGGCGAC AAGATCACCC TCCCGCTGGC CCCGCTGGTC
GCCGCGTGCG GCGCGGCGGT GCCGCAGCTG TCCGGGAGGG GCCTCGGGCA CACCGGCGGC
ACCCTGGACA AGCTGGAGTC CATCCCCGGC TGGCGGGCGC AGCTGTCCCT GGACGAGATC
ACCGCCCAGC TGGGCTCGGT CGGCGCCGTG GTCTGCGCGG CCACCACCGG CCTGGCCCCG
GCGGACCGCA AGCTGTACGC CCTGCGGGAC GTCACCGGCA CGGTCGAGGC GATCCCGCTG
ATCGCCAGCT CGATCATGTC GAAGAAGATC GCCGAGGGCG CGGACGCGCT GGTGCTGGAC
GTGAAGGTCG GCTCCGGGGC GTTCATGAAG ACCGAGGAGC GGGCGCGTGC GCTCGCGCGG
GCGCTGGTGG ACATCGGCGT TGACCACGGC CGCAAGGTGA CCGCGCTGCT GACGGACATG
TCGGTGCCGC TGGGCGCGGC GGTCGGCAAC GCGATCGAGG TCGCCGAGTC GGTGGACGTC
CTGCGCGGCG GCGGCCCGGA GGACGTGGTC GAGCTGACCG TCGCCCTGGC CCGCGAGATG
CTGGCGCTGG CGGGGATCGA CGTGGACCCG GCGCGCGTGC TGGCGTCCGG CGAGGCGTAC
GAGACGTGGG CCCGGATGAT CAGGGCCCAG GGCGGCGACC CCGAGGCGGA GCTGCCGGTC
GCGAAGCACA CGCGGGTGCT GGAGGCCGCC GAGGACGGCG TGCTGACCGG GCTGGACGCG
TACGCGGTCG GCGTCGCGGC GTGGCGGCTC GGCGCGGGCC GGGCCCGCAA GGAGGACCCG
GTGCAGGCCG GGGCCGGGGT GAGGTGCCTG GTGAAGCCGG GTGCGGCGGT GAGCGCGGGA
CAGCCGATCG CGGAGCTGTA CACGGACACG CCGGAGGCGT TCGACGCGGC GTTCGAGACG
CTGCGCGGGG GCGTGGAGCT GAACGGGGAG GTCACCGAGC GCTCGGCGCT GGTGATCGAC
ACGATCCGCG GCTGA
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| Protein sequence | MSHTAVDVIR AKRDGLRLTD GQVDWVVDAY TRGEVADEQM SALAMAIFLN GMDAAETARW
TRAMIASGDV LDLRVDRPTV DKHSTGGVGD KITLPLAPLV AACGAAVPQL SGRGLGHTGG
TLDKLESIPG WRAQLSLDEI TAQLGSVGAV VCAATTGLAP ADRKLYALRD VTGTVEAIPL
IASSIMSKKI AEGADALVLD VKVGSGAFMK TEERARALAR ALVDIGVDHG RKVTALLTDM
SVPLGAAVGN AIEVAESVDV LRGGGPEDVV ELTVALAREM LALAGIDVDP ARVLASGEAY
ETWARMIRAQ GGDPEAELPV AKHTRVLEAA EDGVLTGLDA YAVGVAAWRL GAGRARKEDP
VQAGAGVRCL VKPGAAVSAG QPIAELYTDT PEAFDAAFET LRGGVELNGE VTERSALVID
TIRG
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