| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6430 |
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| Symbol | |
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| ID | 8330641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 7525948 |
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| End bp | 7528944 |
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| Gene Length | 2997 bp |
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| Protein Length | 998 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644946858 |
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| Product | pentapeptide repeat protein |
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| Protein accession | YP_003104077 |
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| Protein GI | 256380417 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5635] Predicted NTPase (NACHT family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGCGGG TGGAGTTCCC AGGGCGGGGT TCGACCGATG GGGTCGTGCG GCGGTGGCTG
CCCTCGCCTT CGGAGGACGT GGCCCGGCTG GAGCTCTCCG CCGTGCCGGG TGGTGTTGAC
CCCGCTGTGC TGGCTTCGCG GTCGCCGTTG CCGGGTCGGG TGGTGCGGGT GTTCGGGTAT
CCCGGCAAGC CGTCGCGGCC CCAGGGGGCG TGGGTGGAGG CGGTGGTGCG CGGGCACGTT
GACGGCGGGT TGGTCCAGCT GGACTCGCGG TCGGCGTTGC AGGTGCAGCG GGGGTACAGC
GGGAGTCCGG TGTGGGACGA CACGTCGGGG CGCGTGGTGG GCGTGGTGGC GATGGCCGGG
GTGTCGACCT TGGACAGCTA CGCGGTGCCG GTCGAGGTGC TGGCGGAGCT GACGGCGGAC
TGGCGGTCGA CCGATCCGGT GGTGCTGCAC CTGCCTGGGC TTCGGTGCGG GAGCGGGTTA
CCCCTGCCTG GTTTTGGGGA CGACGTGCGG GCGGACCTGG TGGTGGTTGC CGGGGATCTG
ACGGAGCACG GGTTGCGGAG CGAGTTCGCC GAGGCTTTTG GGGTGTTGGC GGGGATCGCC
GAGCGGTTGG GGTTGGCGCG CGACCGGGTG GCGGTGGTGC CGGGGACGCG GGACGTGAAC
TTGAAGGCGT GCGCGGCGTA CTTCCTGGCG GCTGAGGCGG AGGAACGCGA GCCGGTGCCG
CCTTATTGGC CTAAGTGGCA GGCGTACAAG GAGGCGTTCG ACCGGTTCTA CGAGGGGTTC
GAGGTCGAGT TCACCAGGGA TGAGCCCTGG ACGTTGTACG AGCACCCGGA GTTGGGGGTG
GCCGTTGCCG GGGTGAACTC GACGGTGGGG GTCAGTCACC TCGATACGCG TGGGGTGGGG
GTGGCGCGGC CTCCGGCGCA GCGGGTGGAG GAGTGCCGGG CGCGGGGGTG GTTGGTGCTC
GGGGTGGCGC ACGGCTTGGA AGCGGACAGG TCGTGCGACG CGTGGTTCCG GGATCTGCAG
GACGCCGCCG TGGTCGCCGT TCGACGCGGG GTGGCCCAGC GGGACGAGGT CTCCAGGGAG
CCGGGCGGGT TCTTCGAGCG GGTGGTGGAG GCGACGGTGG TCGCCCGACC CGAGGCGACC
GTGACACCGG CCGAGGGGTA CTTGCGGATC ACCGAGCGGC TTCCCGGTGG CGGGGTGGAC
TCGTGGGCGG TGGGCACGCT TGATGGAGAG GTCACCGCGG CGGTTGTCGA CCGGTTCGCC
GCAGAGGTCC ACACCCGGTT CGCCTCGGGT GACCCCTCTG CCAGGTCGGA ACTGGTTTAC
AGCGGTGCAC CAGCCCCGGA GGAGTTGATC GAGCGGGCGC GGCGCCGCGG TGTCCGGCTG
CGCAGTTGGA TCGACTACCG GGGTCTGATC GACCTGCGCC GGTACGAAGA AGCGCTGCGG
GAGCGGTTGG CGACGGACGC GATCTACCCG GCGGAGCTGT ACGTGCAGCA GCGGTTTCGG
CACTTGCCCG GTGTGGACGC GTTGGCGCAG GTGCTCGACT GGTTGGGGAG CAGCACCGCG
CAGTTCCTCA TGGTCCTGGG GGACTTCGGA CGCGGCAAGT CATTCCTGCT GAGGCAGGTG
GCCCGTGAGC TGACCGGGAT GACTCCGCTG CTGGTGGACA TGCGGAGGCT GGAGAAAGCG
CCGTCGCTGG ATCAACTCCT GGTTCAAGTG CTGGTCGACC AGGGCGTTGA CGTGGTCGAC
GTGACCAAGC TGCGGTACAT GATCAGCAGC GGCCGGGTGG TGCTGCTGTT CGACGGGTTC
GACGAGCTGG AGCTGCGGGT CGGCTACGAC AACGCGGCCG ACTACCTGAC GACGCTGCTG
GACGTGATCA GCGGCGAGGC GAAGGTGGTG CTGACCAGCC GCACCCAGCA CTTCCAGTCG
ACCCGCCAGG TGTTGACGGC GTTGGGGCGT GATGTGGCGT CGTTGAGCGC GAGCAAGTTG
GTGGAGCTGG AGGACTTCAC TGGCGGGCAG ATCCTGGAAT TCCTGCACAG GCACTACGGC
GGGGACGCAG CACGCGCACG GGCTCGGGTT GAACTGCTGC ATGAGGTGCA TGACCTTCTC
GGGCTGTCGG GCAACCCCCG GATGCTGTCG TTCATCGCCG ACCTGGACGA GGACCGGTTG
CGGGAGGTGC AGTGCCGGGA GGGGGCGATC AGCGCGGCCG AGCTCTACCG GGAATTGGTG
ACTCACTGGC TGCTGGGCGA GAGCAAGCGC CAAGAGCACT CGCGCGGGTT GCCGTCGTTC
GACCGGGACG AGCGGTTGCG GGTGTGCACC GAGTTGGCGA TGCAGTTGTG GGACACGACG
GCGGAGACGA TTCAGGAGAA GGACCTGGGG GACGCCGTGA AGGTGTTGAG CAGGTTGTCC
GAGCGGGAGT ACTCGCTGGA GCAAGCCGTG CACGCGGTTG GTTCGGGCAC GCTGCTGGTG
CGGAGGGACA ACGGGTTCGG TTTCGTGCAC CAGTCAGTGC TGGAGTGGCT GGTCGCGAAC
GAGGCGGCGG AAGTGCTGCG GCAGGGCGGT GACATCGGGG ACATCTCGGC GCGGATCATG
TCGCCGCTGA TGGTGGACTT CTTCTGCGAT CTCGCCGGAC ATGAACGCTC GCTAGCGTGG
GCATCAACCC TTCTGTTCAC CAAAAAGGCA GCCACAACCA CGCGCCAGAA TGCTCTCCAG
ATGTTCATCA GGCTGGACGG GCAGGCCCCC CTGAACCTGA GCGGCTTCCA CTTGCGAGGT
CTGATCCTCG ATGGCGTAGA CCTGCGCAAC GCCAACCTGT CCATGGCCGA CTTGCGCGAA
GCAAGTCTAA TGGGCAATGA CCTCACCGGA GCCGTGCTGA CCGGAAGCAG GTGGGCAGGC
GCGGAACTGA TCGAGGTGAT CGGAGCCGAG GCGCGTCCCG AACTCGCCGG TGCGAAGATA
AGGCATAAAT ACCGAAACAT ACGCCGGTTC CTCGGGACGA CTGAAAACGA CCGCTGA
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| Protein sequence | MVRVEFPGRG STDGVVRRWL PSPSEDVARL ELSAVPGGVD PAVLASRSPL PGRVVRVFGY
PGKPSRPQGA WVEAVVRGHV DGGLVQLDSR SALQVQRGYS GSPVWDDTSG RVVGVVAMAG
VSTLDSYAVP VEVLAELTAD WRSTDPVVLH LPGLRCGSGL PLPGFGDDVR ADLVVVAGDL
TEHGLRSEFA EAFGVLAGIA ERLGLARDRV AVVPGTRDVN LKACAAYFLA AEAEEREPVP
PYWPKWQAYK EAFDRFYEGF EVEFTRDEPW TLYEHPELGV AVAGVNSTVG VSHLDTRGVG
VARPPAQRVE ECRARGWLVL GVAHGLEADR SCDAWFRDLQ DAAVVAVRRG VAQRDEVSRE
PGGFFERVVE ATVVARPEAT VTPAEGYLRI TERLPGGGVD SWAVGTLDGE VTAAVVDRFA
AEVHTRFASG DPSARSELVY SGAPAPEELI ERARRRGVRL RSWIDYRGLI DLRRYEEALR
ERLATDAIYP AELYVQQRFR HLPGVDALAQ VLDWLGSSTA QFLMVLGDFG RGKSFLLRQV
ARELTGMTPL LVDMRRLEKA PSLDQLLVQV LVDQGVDVVD VTKLRYMISS GRVVLLFDGF
DELELRVGYD NAADYLTTLL DVISGEAKVV LTSRTQHFQS TRQVLTALGR DVASLSASKL
VELEDFTGGQ ILEFLHRHYG GDAARARARV ELLHEVHDLL GLSGNPRMLS FIADLDEDRL
REVQCREGAI SAAELYRELV THWLLGESKR QEHSRGLPSF DRDERLRVCT ELAMQLWDTT
AETIQEKDLG DAVKVLSRLS EREYSLEQAV HAVGSGTLLV RRDNGFGFVH QSVLEWLVAN
EAAEVLRQGG DIGDISARIM SPLMVDFFCD LAGHERSLAW ASTLLFTKKA ATTTRQNALQ
MFIRLDGQAP LNLSGFHLRG LILDGVDLRN ANLSMADLRE ASLMGNDLTG AVLTGSRWAG
AELIEVIGAE ARPELAGAKI RHKYRNIRRF LGTTENDR
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