| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6419 |
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| Symbol | |
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| ID | 8330630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 7515313 |
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| End bp | 7517094 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644946847 |
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| Product | Methylmalonyl-CoA mutase |
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| Protein accession | YP_003104066 |
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| Protein GI | 256380406 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAGC AGCCGGGCGA GCTGGCGCTG GCCGCCGAGT TCCCCGAACC CGACCGCGAG
CGGTGGCTGG GCCTGGTCGA GGGCGTGCTC GGCAAGACCG GCGCCGAGTA CGACTCGCTC
GTCACCACGA CCTACGACGG CATCGCCGTG CAGCCGCTGC ACACCGCCGA CGAGCCCCTG
CCCGCCACCG GCCTGCCCGG CACGTTCCCG TTCACCAGGG GCGGCAGGCC GCAGGGCACC
GCGCTGGGCT GGGAGATCCG CCAGCAGCAC CGGGAGGCCG ACCGCGAGGC GGTCATGGCC
GACCTGGAGA ACGGCGTCGG CGCGCTGTGG CTCAGGGGCA TCGCCGCCGC CGACCTGGAA
CCGCTGCTCG CCGAGGTCTA CCTGGACCTC GCCCCGGTGG TGCTCGACGC GGGGGCCGAC
TTCGCCGCGT CCGGCCGGGA GCTGCTGCGG ATCTGGGGCG AGCGGTCCGC GCCGGGCAGC
GAGCTGGCGG GCAACCTCGG CGCCGACCCG CTCGGCGTCC TCGCCGCCAC CGGGCAGGAG
CCCGACACCG CCGCCCTGCT CGACCTGCTG CCGCGCCTGG ACCCGTTCCC GGCCGCCAGG
CTGATCGCCG TCGACGCCCT CCCGCACCAC GGCGCGGGCG GCTCCGACGC GCAGGAGCTC
GGCGCCTCGC TCGCCGCGGG CGTGGCCTAC CTGCGGCTGC TCACCGACGC CGGGCTCACC
GTCGCGCGCG CCGCTCGGCT GCTGGAGTTC CGCTACGCGG CCACCGCCGA CCAGTTCCTC
ACCACCGCCA AGCTCCGCGC CGCCCGCAGG CTGTGGGCCC GCGTCACCGA GGTGTGCGGC
GAGCCGTCCC CGCAGGTCCA GCACGCCGTG ACGTCCCCGG CGATGATGAC CCGCCGCGAC
CCGTGGGTGA ACATGCTGCG CACCACGATC GCCTGCGCGG GCGCCGGGAT GGGCGGGGCC
GACGCGATCA CCGTGCTGCC GTTCGACCAC GCCATCGGCC TGCCCGACGA CTTCTCCCGC
CGCATCGCCC GCAACACCCA GTCGGTGCTG CTGGAGGAGT CGCGGCTGTC GGCGGTGATC
GACCCGGCGG GCGGCTCCTG GTACGTGGAG CGGCTCACCG AGGACCTCGC GCGGGCCGCG
TGGCGCTGGT TCCAGGAGAT CGAGGCCGGG GGCGGGCTCG CCGCCGCGCT GCGCTCCGGC
CTGGTCGCCG ACCGGCTCGC CGAGACCTGG GAGCGCCGCC GCGCCAACCT CGCCGACCGC
ACCGACGCCA TCACCGGCGT CAGCGAGTTC CCGAACCTGG GCGAGAAGCC CGTCGTGCGC
CGCCCAGCCC CGCCGGAACC CGGCGGCGGG CTGCCCGTGA TCCGGTACGC CCAGGACTTC
GAGGCGCTGC GCGACCGCGC CGACGCCGCC CCCGAGCGGC CGAAGGTCTT CCTGGCCACG
CTCGGACCGG TCGCCGCGCA CACCGCCCGC GCGACCTTCG CCGCCAACCT GCTCCAGGCG
GGCGGCGTCG AGACCCCGCA GGCCGGTCCC ACGAGGACCG CCGACGACGT CGTCGCGGCG
TTCCGCGCCA GCGGCGCCCG CGTCGCCTGC CTGTGCGGCA GCGAGAGCTC CTACGCGGAG
CTGGCCGCCC CCGTCGCCGA CGCCCTGCGC GCGGCGGGCG CCGAGCGCGT CCTGCTCGCG
GGCAAGCGCT CCGACGCGAC CGTCGACGAC CACCTGTTCC TGGGCTGCCC CGCGCTCGAC
GTGCTCGGGC GCACCTTCGA GTCCCTCGGA GTCCCACGAT GA
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| Protein sequence | MMEQPGELAL AAEFPEPDRE RWLGLVEGVL GKTGAEYDSL VTTTYDGIAV QPLHTADEPL
PATGLPGTFP FTRGGRPQGT ALGWEIRQQH READREAVMA DLENGVGALW LRGIAAADLE
PLLAEVYLDL APVVLDAGAD FAASGRELLR IWGERSAPGS ELAGNLGADP LGVLAATGQE
PDTAALLDLL PRLDPFPAAR LIAVDALPHH GAGGSDAQEL GASLAAGVAY LRLLTDAGLT
VARAARLLEF RYAATADQFL TTAKLRAARR LWARVTEVCG EPSPQVQHAV TSPAMMTRRD
PWVNMLRTTI ACAGAGMGGA DAITVLPFDH AIGLPDDFSR RIARNTQSVL LEESRLSAVI
DPAGGSWYVE RLTEDLARAA WRWFQEIEAG GGLAAALRSG LVADRLAETW ERRRANLADR
TDAITGVSEF PNLGEKPVVR RPAPPEPGGG LPVIRYAQDF EALRDRADAA PERPKVFLAT
LGPVAAHTAR ATFAANLLQA GGVETPQAGP TRTADDVVAA FRASGARVAC LCGSESSYAE
LAAPVADALR AAGAERVLLA GKRSDATVDD HLFLGCPALD VLGRTFESLG VPR
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