| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6410 |
|---|
| Symbol | |
|---|
| ID | 8330621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7504523 |
|---|
| End bp | 7505263 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644946838 |
|---|
| Product | major intrinsic protein |
|---|
| Protein accession | YP_003104057 |
|---|
| Protein GI | 256380397 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCG GTTCGATCTT CGTCTGGGAG ACGCTCGGCA CCGCCCTGCT GATCCTGCTG
GGTGCGGGCG TCGTGGCCAA CGTGACGCTC AAGGACTCGC TCGGCAAGGG CGGCGGCTGG
CTGCTGGTCA ACTTCGGCTG GGGTCTCGCC GTGTTCGTGG GCGCCAGCGT CTCGGCCCCG
AGCGGGGCCC ACCTCAACCC GGCCGTCACC CTCGGCCTGG CCGCCGCGGG CAAGACCGAG
TGGGCCGACG TGCCGGTCTA CTTCGCGGGG CAGATGATCG GTGCCATGCT CGGCGCGACG
CTGGCCTGGC TGGCCTACAA GAAGCAGTTC GACAACCACG ACGACCCGGC GGGCACCAGG
GGCGTCTTCT GCACCGGTCC GACCGTCGCC AGCGCGCCGT GGAACGTCCT CACCGAGGTG
ATCGGCACGT TCGTGCTGGT CATCTGGATC CTGCTCAGCC CCGGCGTCGA GCTGGCCGCC
GACGGCACCC CCAACTTCGG CAACTCCGCC CTGGGCTACG CGGGCGTGGC GTTCCTCGTC
ATCGGCCTCG GCGCCTCCCT CGGCGGCCCC ACCGGCTACG CCATCAACCC GGCCCGCGAC
CTCGGCCCCC GCATCGTCTA CGCGCTCCTG CCGATCAAGG GCAAGGGCAG CGCCGAGTGG
GGGTACTCCT GGGTCCCGGT GGTCGGGCCG CTGATCGGTG GCGCGCTCGC CGCACTCCTG
TACCTGGCAC TCCCGGTCTG A
|
|---|
| Protein sequence | MTAGSIFVWE TLGTALLILL GAGVVANVTL KDSLGKGGGW LLVNFGWGLA VFVGASVSAP
SGAHLNPAVT LGLAAAGKTE WADVPVYFAG QMIGAMLGAT LAWLAYKKQF DNHDDPAGTR
GVFCTGPTVA SAPWNVLTEV IGTFVLVIWI LLSPGVELAA DGTPNFGNSA LGYAGVAFLV
IGLGASLGGP TGYAINPARD LGPRIVYALL PIKGKGSAEW GYSWVPVVGP LIGGALAALL
YLALPV
|
|---|
| |