| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6383 |
|---|
| Symbol | |
|---|
| ID | 8330594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7475915 |
|---|
| End bp | 7478260 |
|---|
| Gene Length | 2346 bp |
|---|
| Protein Length | 781 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 644946811 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003104030 |
|---|
| Protein GI | 256380370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTGGA CCGGGCCGTG GCCGACCTGG GCCAGAGCAC CGAGCAGGCG GTCGACCTGG
GGCCACAGCG CAGCGCCTGC CGCCGCGCAC CTCGCGGACC CGGCCGCAGC CGACCTGGGT
CAGGTCACCG CGCACGCGAC GCCTGCCGCT GCCGCGCACC TCGCCGCCGG GGCCGCGGCC
GACCTCGGCC AGGTCGCCGC GCACGCGGCA CCCGAGGCTC CCGCCCACCT CGCCGACCGC
GCCGCGGCCG ACCTCGGCCA GGTCGCGTCG CCCGTCGCCC CCGACCTCGG GCACGTCGTG
GCGGGCGTGG CCCCCGATGG CGCGGCCCCG GTCTCCGACC GGGACGCCGA GTGGCCCGCG
GTCCCGCTCA CCGAGCCCGT TCCCCTCGTG CACGAGGCGA TCCCCGCCGC CGGTCTGGTC
GCGGGCGCCA CCGGGCTCGT GCCCGGCGCG GCGCACGCGG CCGAGCGGGC CGGCGCGTGG
ACCGCGCCGG TCGCCGCCGA GGTCGAGGAG GCCGCCGACC AGGGCGGTCT CGCCGCCGGG
GTGCGCCAGG CGGGCGCGGA AGCCGCTCAG CAGCCGCTCG GCCACACCGT CGCCAGCGCC
GCCGCCGACC TCACGGCCGG TTCCGGCGTC CCCCTGGAGG TCGACGGGGC CGACCACGCG
CCGCTCCCCG GCTCCCGGCT CTCCGACGAC GCGCGCGACG CGGCGGACAA CGCGGTCGGC
GCGGGCCCGG ACGCCGTGGC GCAGGGCGTC GCGGCCGACG GCGGCCAGAC CACGACCAAC
CAGTTCGCGG GCGCCCCCAT GGGCGGCGGC ATGATGCCGC CCCCCGCCGC GGGCGGCGCG
CCGACGGCCC AGGCCACCCA CTCCACCGCG CACGCCGTGC CGCAGTCGAC CGCGTTCGGC
GCCCGACCGC AGACCGACGG CGTCCAGCAC GCGGGCCACA TCGACGCGGC TGACGTCGAA
CCCGACCTGG ACGACCGCGA CAGCGGTGTC ACGCACCGCT CCAGCGGCCT GTCCGGCGGC
GTCACGCCCG GCGAGGGCCA GCAGGTCGAG CGCGACCGGG ACCCGGCCCC GGCGGCGCAG
GCCCCGGAAC CGGCGCAGCA GTCCCAGCAG GCGCAGAACG ACCAGGCCGG GATCGGCGCG
GGCCTCGGCT TCATGCCGAT GATGGCCATC CCGCCGCAGG CCATGGGCGG TGGTGGCGGC
GCGCCGGCGT CCCAGCGGGC CGGTGGCGCG CCCGCGCCGA CCGGGGTCCC CGCAGGCCAG
GACCACGACC CGGACCTGAG GTCCGAGCCG AGGCCCCCGG CGAAGCCCGG CGCCCGTCCC
GGCCACCTGG ACCTCACCCC CGACCCGAAC GCGCCCCTGG ACGCGCCCGC CCGCACCCCG
CTGGTGAAGG CCCCGACGGC GGCGGAGATG CCCACGGCGC CCGCCGTGCC CGACGTCCCC
GCCGTGCCGG CGGCGCCCAC GCCTCCCGCG CCGTCCGCCG CGCCGACCGC CGCCATCCCG
GTGGTCGCGG CGCAGGCCGC CGCAGAGCAG AACGCGGCTG GGCAGAACGC GGAGGTGCAG
AACACGGCGG TGCAGAACAC GGCTGGGCAG GCCACGGCCG GGCGGGTCAC CACCACCCAG
ACCGCCGCGC AGGCCACCGA CCAGCCCGCC ACCGAGCCCG CCACCGAGCC CGACGCGGAC
CCCGCCTCCG ACTCCGACCA GTCCACCTCG GACCTGTCCG CGTTCGTGCT GGCCCTGTTC
CCCGGTGGTT CGCTCCCCGA GCCGAGCCGC CGCCCGACCC GCCAGCTCCC GCCCCCGGCC
GAGTCCGACG ACGACTACGC GGACGGCCTG CGCTTCCCGC CCGGCGACCA CCCGCAGTCC
CACCTGGTCG CCGCCGCCCC GCCCGCCACC ACCCCGTCCT CGGGCAAGCC CAACACCCCC
GAGCCGCCCG CGGCGGTCAT GGCGGGCTAC GACCCGCTGG CCGGGATGCA CGAGCGCGAC
TGGGAGCACC GCTTCCTGGC CAGGGCGCAA CCGCCGGAGT ACGCCTGGCC GCCCGCCGAG
CTGTTCCCCG AGGGCGGCTA CGAGTCGGGC CAGCCGGTCA AGCTGGCCCC CGGCACCGTG
CTGGACCGCT TCGGCACCCC GGAGGGCCGC GTCCTGTCCC GGTCCGGCAC CCCGTACCCG
GCCCGCGCCC TGCCGCCCGC CGCCGCGAGC TCCGGCTACC GCCGGTACCG GGTGCTGCGC
GAGCTGCCCG CGTACTACAC GCTGTCCGCC GAGTGGTTCG GCCAGCGCGG CGGGGGCGCC
CGCTACCGCG CCACCCACCC CGTCGCCGAC CTGGTGGCGC TGGGCTACCT GGAGGAGCTG
CCGTGA
|
|---|
| Protein sequence | MSWTGPWPTW ARAPSRRSTW GHSAAPAAAH LADPAAADLG QVTAHATPAA AAHLAAGAAA
DLGQVAAHAA PEAPAHLADR AAADLGQVAS PVAPDLGHVV AGVAPDGAAP VSDRDAEWPA
VPLTEPVPLV HEAIPAAGLV AGATGLVPGA AHAAERAGAW TAPVAAEVEE AADQGGLAAG
VRQAGAEAAQ QPLGHTVASA AADLTAGSGV PLEVDGADHA PLPGSRLSDD ARDAADNAVG
AGPDAVAQGV AADGGQTTTN QFAGAPMGGG MMPPPAAGGA PTAQATHSTA HAVPQSTAFG
ARPQTDGVQH AGHIDAADVE PDLDDRDSGV THRSSGLSGG VTPGEGQQVE RDRDPAPAAQ
APEPAQQSQQ AQNDQAGIGA GLGFMPMMAI PPQAMGGGGG APASQRAGGA PAPTGVPAGQ
DHDPDLRSEP RPPAKPGARP GHLDLTPDPN APLDAPARTP LVKAPTAAEM PTAPAVPDVP
AVPAAPTPPA PSAAPTAAIP VVAAQAAAEQ NAAGQNAEVQ NTAVQNTAGQ ATAGRVTTTQ
TAAQATDQPA TEPATEPDAD PASDSDQSTS DLSAFVLALF PGGSLPEPSR RPTRQLPPPA
ESDDDYADGL RFPPGDHPQS HLVAAAPPAT TPSSGKPNTP EPPAAVMAGY DPLAGMHERD
WEHRFLARAQ PPEYAWPPAE LFPEGGYESG QPVKLAPGTV LDRFGTPEGR VLSRSGTPYP
ARALPPAAAS SGYRRYRVLR ELPAYYTLSA EWFGQRGGGA RYRATHPVAD LVALGYLEEL
P
|
|---|
| |