Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6370 |
Symbol | |
ID | 8330581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7462784 |
End bp | 7463635 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644946798 |
Product | ABC transporter related |
Protein accession | YP_003104017 |
Protein GI | 256380357 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCG CTGTGAGCAG CGCGGTCCGC GCGTCCGGGC TCGGCAAGAG CTACGGCGGC ACGTGGGCCC TGCGCGACTG CTCGTTCGAG CTGCCCGCCG GTCGGGTGGC CGCGCTGGTG GGCGCGAACG GCGCGGGCAA GACGACGCTG CTGAGCGTCC TCGCCGGTTT GCTCGAGGCC GACGCGGGCA GCGCGGACGT CGACGGCCGC GTCGCGTTCG TCGCGCAGGA CAAACCGCTC TACAAGGGCT TCACCGCCCA CGACGCCCTC ACCATGGGCG CCCGGCTGAA CACCGCGTGG GACCAGGCCA AGGCCGTCGC CTGGCTGGAC CGCTTCGAGG TCCCCCGCAC CCGCGCCTGC GGCAAGCTCT CCGGCGGCCA GCAGGCCCAG GTGGCGTTCG CGCTGGCACT CGGCTCCTGC CCGGACGTGC TCCTGCTCGA CGAGCCGCTG GCCAACCTGG ACCCGCTGGC CCGCCGCGAG GTCGCCGCCG CGCTGCTCGA CGAGGTCGCC GAGACCGGCA TGACCGTCGT GCTGTCCACG CACGTGATCA CGGAGCTGAC CGGCGTCGCC GACCACCTGC TCCTGCTCTC GAACGGCGGC CTGCTCGCGG ACGACGACGT GGACGGCCTG CTGGCCCACC ACGCCGCGTA CACCGGCCCG CGCTCGGACG CGCCGCCGGT GGAGGGCCGG GTCGTGGAGG CCAGGCACAG CGCCAACCAG TCCACCTTCC TGGTGCGCCT CCCGGACGGC CCGCGACCGC CCGTCGCGGA CCGGTGGGTG GAACGAGCGG TGACCCTGGA GGACTACGTG CTCGCGCGCC TCGCCGAGAG CAGGAAGGGC GGTGCCGAAT GA
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Protein sequence | MTTAVSSAVR ASGLGKSYGG TWALRDCSFE LPAGRVAALV GANGAGKTTL LSVLAGLLEA DAGSADVDGR VAFVAQDKPL YKGFTAHDAL TMGARLNTAW DQAKAVAWLD RFEVPRTRAC GKLSGGQQAQ VAFALALGSC PDVLLLDEPL ANLDPLARRE VAAALLDEVA ETGMTVVLST HVITELTGVA DHLLLLSNGG LLADDDVDGL LAHHAAYTGP RSDAPPVEGR VVEARHSANQ STFLVRLPDG PRPPVADRWV ERAVTLEDYV LARLAESRKG GAE
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