Gene Amir_6370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6370 
Symbol 
ID8330581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7462784 
End bp7463635 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID644946798 
ProductABC transporter related 
Protein accessionYP_003104017 
Protein GI256380357 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCG CTGTGAGCAG CGCGGTCCGC GCGTCCGGGC TCGGCAAGAG CTACGGCGGC 
ACGTGGGCCC TGCGCGACTG CTCGTTCGAG CTGCCCGCCG GTCGGGTGGC CGCGCTGGTG
GGCGCGAACG GCGCGGGCAA GACGACGCTG CTGAGCGTCC TCGCCGGTTT GCTCGAGGCC
GACGCGGGCA GCGCGGACGT CGACGGCCGC GTCGCGTTCG TCGCGCAGGA CAAACCGCTC
TACAAGGGCT TCACCGCCCA CGACGCCCTC ACCATGGGCG CCCGGCTGAA CACCGCGTGG
GACCAGGCCA AGGCCGTCGC CTGGCTGGAC CGCTTCGAGG TCCCCCGCAC CCGCGCCTGC
GGCAAGCTCT CCGGCGGCCA GCAGGCCCAG GTGGCGTTCG CGCTGGCACT CGGCTCCTGC
CCGGACGTGC TCCTGCTCGA CGAGCCGCTG GCCAACCTGG ACCCGCTGGC CCGCCGCGAG
GTCGCCGCCG CGCTGCTCGA CGAGGTCGCC GAGACCGGCA TGACCGTCGT GCTGTCCACG
CACGTGATCA CGGAGCTGAC CGGCGTCGCC GACCACCTGC TCCTGCTCTC GAACGGCGGC
CTGCTCGCGG ACGACGACGT GGACGGCCTG CTGGCCCACC ACGCCGCGTA CACCGGCCCG
CGCTCGGACG CGCCGCCGGT GGAGGGCCGG GTCGTGGAGG CCAGGCACAG CGCCAACCAG
TCCACCTTCC TGGTGCGCCT CCCGGACGGC CCGCGACCGC CCGTCGCGGA CCGGTGGGTG
GAACGAGCGG TGACCCTGGA GGACTACGTG CTCGCGCGCC TCGCCGAGAG CAGGAAGGGC
GGTGCCGAAT GA
 
Protein sequence
MTTAVSSAVR ASGLGKSYGG TWALRDCSFE LPAGRVAALV GANGAGKTTL LSVLAGLLEA 
DAGSADVDGR VAFVAQDKPL YKGFTAHDAL TMGARLNTAW DQAKAVAWLD RFEVPRTRAC
GKLSGGQQAQ VAFALALGSC PDVLLLDEPL ANLDPLARRE VAAALLDEVA ETGMTVVLST
HVITELTGVA DHLLLLSNGG LLADDDVDGL LAHHAAYTGP RSDAPPVEGR VVEARHSANQ
STFLVRLPDG PRPPVADRWV ERAVTLEDYV LARLAESRKG GAE