| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_6365 |
|---|
| Symbol | |
|---|
| ID | 8330576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 7456873 |
|---|
| End bp | 7458351 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644946793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003104012 |
|---|
| Protein GI | 256380352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAATGT ATCATGAACT TTATTTCGGT CTTGCCGATG GTCGTCGGGA AGCTCGTCAA
GCGCCAGAAC GTTTCGTAAA AAGCTTCGTA GATATAAAGA ATGCTGTGCA CCTTCTGAAA
TCCGGGGAAA AATTTCTGCT TTTGGGGCCG AAGGGTGCCG GTAAATCTGC ATTTGCTGCA
TACTTGGACA AAACTCAAGA TATGCAAACC GAATTTGTTC AAGTTAGAGA TTTGAGTACG
CTTCCTTTTG ATCAGATCGA TAAGGTTAAA ACGGGAGAAC CGGGCGGCCC AGGTCGGGTT
ATCACTGTAT GGAAATTGCT GCTTTACGCT GGCATTCTTG ATATTGTCAT GAAGGATCAA
TCGCACGCTT TTCAGCGCGA CCCGCAAATG CTTAAACTTG TTGATGAGCT GCGACGCCTT
GGATTTATGG CCGCTTCGCC AAAAGCGGCA GTTCTTGGAG CGGCTAAGTC TACTTACAAG
TTGACAATCC CCGGTCTGGG TAACGTCTAC ACCCGTGAGA AGACTGAAAG CTTTAATCTG
TATCACGTCG TTAACCACCT AGAAGACCGG ATTCTAAATT CAGATTCTTC CGGCCATGTT
TATACGCTTA TCCTTGACGG CCTCGATTCG ATATATCTCA CAGATCCAAA CTATTCCTCT
GCGATAGCAA GCCTCTTGCA AGCGGCTTAT GAGATTTATG AAATACTAGG AGAAGGGGAG
TCGCGAGCCA GGGTGGTTTT GCTTCTCCGG AATGACATAT TTACTCGTCT TCAACTCCCC
GACGCAGGGA AAATGCGTCA AGATCTTTCT ATTGATTTGG ATTGGAGGGT TCTTTCTAGG
ACCCCTCAGC AGTCCAATCT TTTTGAACTG GTAAATAGGA AAGCCTCGGC AATGCTGGAA
AAGCAAAGCT TGGCGGTTGT GCAAGATTTT TTTCCGAAAG ATGTTCAAGT AGGTGCCAGG
CCTCCGAAGT GGCTTAATAT TTATTCTTAC CTTTTGGGTC TAACCAGGCA TACTCCGCGA
GATTTGCTTC GCCTGCTCGA GTATATACGC GAGGTTGAAA GCGAGCAGGG ATCTTCAAAA
AAGCCTGGCG CTAAACTTTC TAATGAAGTT ATCCGGGAGG GGGCGCTTCG ATATTCTTCT
AAGTACTTTG TCGAGGCTAT CGAAAACGAG CTAGTTGGCC TACAAGGGGA AAGTGATCTA
GCATCTCGCG CGGTTTCAAC GCTAAGGCAC CTACGTAAGG CAACTTTTAC TGCGAAGCAG
TTTTCTAGAG ATCTTCTAGG TTCTTCTGAA GATGACTTCA GACAAGCGGA AGAAATGCTG
AAATGGCTGT TTTTCGCAGG AGCCGTGGGA AATGTTGTGG CAAATAAAAG CGAGCGCTAT
CTTCAGTTTT ACCACAGGCG GGACAATGCT GAGGTTTACC TTAAAGGTGA ATTGATATTG
CATAACGCCC TCCTGCATGC ATGGAATATT CCTAGATAG
|
|---|
| Protein sequence | MVMYHELYFG LADGRREARQ APERFVKSFV DIKNAVHLLK SGEKFLLLGP KGAGKSAFAA
YLDKTQDMQT EFVQVRDLST LPFDQIDKVK TGEPGGPGRV ITVWKLLLYA GILDIVMKDQ
SHAFQRDPQM LKLVDELRRL GFMAASPKAA VLGAAKSTYK LTIPGLGNVY TREKTESFNL
YHVVNHLEDR ILNSDSSGHV YTLILDGLDS IYLTDPNYSS AIASLLQAAY EIYEILGEGE
SRARVVLLLR NDIFTRLQLP DAGKMRQDLS IDLDWRVLSR TPQQSNLFEL VNRKASAMLE
KQSLAVVQDF FPKDVQVGAR PPKWLNIYSY LLGLTRHTPR DLLRLLEYIR EVESEQGSSK
KPGAKLSNEV IREGALRYSS KYFVEAIENE LVGLQGESDL ASRAVSTLRH LRKATFTAKQ
FSRDLLGSSE DDFRQAEEML KWLFFAGAVG NVVANKSERY LQFYHRRDNA EVYLKGELIL
HNALLHAWNI PR
|
|---|
| |