Gene Amir_6362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_6362 
Symbol 
ID8330573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp7453733 
End bp7455400 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content72% 
IMG OID644946790 
Producthypothetical protein 
Protein accessionYP_003104009 
Protein GI256380349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGT CCACCAACCC CGTCGTCCCG GCCGTGCCCC TCGACGTGGC GGGCATGACC 
TCGGCCGAAC GCGCCCGGAT GCCGCTGTCC CTGGACGTGG TCAAGGCGGC GGCCGAACAG
CACGGCGTGT GCACCCGTCC CATCCTGCGC GAGGTGGTCG ACCTCGACTC CGGGGAAGTG
CGCATCGTCG GCGTCCGCTG CAACTCCACG CAGGCGTCCA AGTGCGCGGC CTGCGCCGAC
CGCAACCGCC GCTCCCGCAT GGCCCAGTGC CGCGAGGGCT GGCACCTCGA CGCTGAGCCT
GTGGCGGAGC GCCACGCCCC GAACAGCGAC CAGGTGGGCC TGGTGACCTA CCGGGCCGAT
CTCACCGCCG AGTACCGGCG GGCTGCCGCC GAGGGCGACC ACGATCAGGT TGAGGACCTG
CGCGAGGGCA TCCGGGAAGC CGATGCCGAC CTGCGCGCGG AGGGCGTCCG CGGGAACCTC
CCCAGCGTCG AACGCGATCC TCGACCGGCG CCCGCGCGTT CGACCCGGCG ACGCCAGGAC
ACGCCGAACC TGCCCCGCCG GAAGGTCTCC AAGCGCACCG TGGGGCGGGA GTTCGCGGGC
AGGTACCGGC CCTCGACCTT TATCACCCTG ACCCTGGACA CCTACGGCCC GGTCACCTCC
GAAGGTGCCC CGGCCGACCC TGGCGCGTAC GACTACCGGC GGGCCGCTCG GGACGCGGTC
CACTTCGCCT CCCTGGTCGA CCGCTGGTGG CAGAACCTCC GCCGGGTGGT CGGGTTCGAC
GCCCAGTACT TCGGCACGGT CGAACCGCAG CGTCGCATCA CGCCTCACGC CCACTTCGCC
GTGCGCGGCT CGATCCCGCA CAAGGTCGTC CGCCAGGTCA CCGCCGCGAC TTACCTCCAG
GTCTGGTGGC CCGACCACGA CCAGGTGCGG TACGCGGGCG ACCTGCTCCC GGTCTGGGAC
ACCCGCCAGT CAGGCTTCGT GGACCCGGAC ACTGAACGCC TGCTGACCCC GTGGGTCGAC
GCGGTGGCCG ATCTGGAGCG ACCGGCCCAC GTCGCCACGT TCGGCCCGCA GGTGCACTCC
AAGGGCATCC TCGGCGGCAC CGAGGAATCC GGGCGGCACA TCGGCTACCT GACCAAGTAC
CTCACCAAGT CGATCACCGA AGTGGTGGAC GCGGACACCA CCCCGCGCCT GGCCGACCAC
GCCGACCGCC TGGCGTCCGA ACTCGCCCTC ACCCCGTGCT CGGAGCGCTG CGCGGTCTGG
CTGCTCTACG GGGTCCAGCC CAAGGGCGTC ACCTCCCGCA CCACCCCCGG CCACTGCAAG
GGCAAGGCCC ACCGCCGCGA CACCCTCGGC CTGCCCGGTC GCCGGGTGCT GGTCTCGCGC
CGCTGGTCCG GCAAGACCCT CTCTGAGCAC AAGGCGGACC GGGCCGCGTT CGTACGGGAA
GCCTTGGCCG CCGCTGGCAT CGCCAAGCCC GACGACACCA CCGCCCGGCT CCAGTGGGGG
CCGGTCCAGC CGGGGGACCC GCACGCCCCG TCACGGGCCG AACTGCTCAT GCACATGATC
GCCCAGCGGT TGGCCTGGCA AGCCGAGTAC CAGCGGGCGC AAGCGGTCCT CACGCACCTG
CCGCCTCCAC GGCCCGATGT TTCAGCAACT TCGCCGGTAG CGGCCTGA
 
Protein sequence
MSESTNPVVP AVPLDVAGMT SAERARMPLS LDVVKAAAEQ HGVCTRPILR EVVDLDSGEV 
RIVGVRCNST QASKCAACAD RNRRSRMAQC REGWHLDAEP VAERHAPNSD QVGLVTYRAD
LTAEYRRAAA EGDHDQVEDL REGIREADAD LRAEGVRGNL PSVERDPRPA PARSTRRRQD
TPNLPRRKVS KRTVGREFAG RYRPSTFITL TLDTYGPVTS EGAPADPGAY DYRRAARDAV
HFASLVDRWW QNLRRVVGFD AQYFGTVEPQ RRITPHAHFA VRGSIPHKVV RQVTAATYLQ
VWWPDHDQVR YAGDLLPVWD TRQSGFVDPD TERLLTPWVD AVADLERPAH VATFGPQVHS
KGILGGTEES GRHIGYLTKY LTKSITEVVD ADTTPRLADH ADRLASELAL TPCSERCAVW
LLYGVQPKGV TSRTTPGHCK GKAHRRDTLG LPGRRVLVSR RWSGKTLSEH KADRAAFVRE
ALAAAGIAKP DDTTARLQWG PVQPGDPHAP SRAELLMHMI AQRLAWQAEY QRAQAVLTHL
PPPRPDVSAT SPVAA